Mercurial > repos > iuc > bcftools_plugin_counts

annotate test-data/stats.b.vcf @ 12:b781fa08aa3c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit f137c76ba915d49f93c5535f486a4a8fa32f6e56"
author iuc
date Tue, 14 Jan 2020 08:11:31 -0500
parents 06cd2a0252dc
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
1 ##fileformat=VCFv4.2
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
3 ##contig=<ID=1,assembly=b37,length=249250621>
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
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6 1 1000 . G A . PASS . GT 0/1 0/0 0/0
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
7 1 1001 . G A . PASS . GT 0/0 0/0 0/0
06cd2a0252dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
8 1 1002 . G A . PASS . GT 0/0 0/1 0/0