Mercurial > repos > iuc > bcftools_plugin_impute_info

comparison bcftools_plugin_impute_info.xml @ 5:a15210afaf1d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
author iuc
date Thu, 13 Apr 2017 17:45:43 -0400
parents c6071203aaa0
children 6f8e223f78f3
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4:c6071203aaa0 5:a15210afaf1d
11 <command detect_errors="aggressive"><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
12 @PREPARE_ENV@ 12 @PREPARE_ENV@
13 @PREPARE_INPUT_FILE@ 13 @PREPARE_INPUT_FILE@
14 #set $section = $sec_restrict 14 #set $section = $sec_restrict
15 @PREPARE_TARGETS_FILE@ 15 @PREPARE_TARGETS_FILE@
16 @PREPARE_REGIONS_FILE@
16 17
17 bcftools plugin @EXECUTABLE@ 18 bcftools plugin @EXECUTABLE@
18 19
19 ## VCF input section 20 ## VCF input section
20 #set $section = $sec_restrict 21 #set $section = $sec_restrict
26 @OUTPUT_TYPE@ 27 @OUTPUT_TYPE@
27 @THREADS@ 28 @THREADS@
28 29
29 ## Primary Input/Outputs 30 ## Primary Input/Outputs
30 @INPUT_FILE@ 31 @INPUT_FILE@
31 > "$output_file" 32 > '$output_file'
32 ]]> 33 ]]>
33 </command> 34 </command>
34 <inputs> 35 <inputs>
35 <expand macro="macro_input" /> 36 <expand macro="macro_input" />
36 <section name="sec_restrict" expanded="false" title="Restrict to"> 37 <section name="sec_restrict" expanded="false" title="Restrict to">