Mercurial > repos > iuc > bcftools_plugin_missing2ref

comparison test-data/concat.3.d.vcf @ 0:5e9cf5308e97 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
author iuc
date Wed, 06 Jul 2016 07:07:16 -0400
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-1:000000000000 0:5e9cf5308e97
1 ##fileformat=VCFv4.0
2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
6 ##FILTER=<ID=q10,Description="Quality below 10">
7 ##contig=<ID=2,length=62435964>
8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B
9 2 300 . T A 246 PASS DP=10 GT 1|0 1|0
10 2 320 . T A 246 PASS DP=10 GT 1|0 1|0
11 2 330 . T A 246 PASS DP=10 GT 1|0 1|0
12 2 340 . T A 246 PASS DP=10 GT 1|0 1|0
13 2 350 . T A 246 PASS DP=10 GT 1|0 1|0
14 2 360 . T A 246 PASS DP=10 GT 1|0 1|0
15 2 370 . T A 246 PASS DP=10 GT 1|0 1|0
16 2 380 . T A 246 PASS DP=10 GT 1|0 1|0
17 2 390 . T A 246 PASS DP=10 GT 1|0 1|0
18 2 490 . T A 246 PASS DP=10 GT 1|0 1|0
19 2 500 . T A 246 PASS DP=10 GT 1|0 1|0
20 2 510 . T A 246 PASS DP=10 GT 1|0 1|0