Mercurial > repos > iuc > bcftools_plugin_missing2ref

comparison bcftools_plugin_missing2ref.xml @ 23:793ae03deb13 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/bcftools commit f6efda26965eb73c9107d367fd5ffdf246ed0dbc
author iuc
date Tue, 02 Dec 2025 08:04:56 +0000
parents 8b260d252ff4
children
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22:8b260d252ff4 23:793ae03deb13
7 </macros> 7 </macros>
8 <expand macro="bio_tools" /> 8 <expand macro="bio_tools" />
9 <expand macro="requirements" /> 9 <expand macro="requirements" />
10 <expand macro="version_command" /> 10 <expand macro="version_command" />
11 <command detect_errors="aggressive"><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
12 @PREPARE_ENV@
13 @PREPARE_INPUT_FILE@ 12 @PREPARE_INPUT_FILE@
14 #set $section = $sec_restrict 13 #set $section = $sec_restrict
15 @PREPARE_TARGETS_FILE@ 14 @PREPARE_TARGETS_FILE@
16 @PREPARE_REGIONS_FILE@ 15 @PREPARE_REGIONS_FILE@
17 16
41 ]]> 40 ]]>
42 </command> 41 </command>
43 <inputs> 42 <inputs>
44 <expand macro="macro_input" /> 43 <expand macro="macro_input" />
45 <section name="sec_restrict" expanded="false" title="Restrict to"> 44 <section name="sec_restrict" expanded="false" title="Restrict to">
46 <expand macro="macro_restrict" /> 45 <expand macro="macro_region_restrict" />
47 <expand macro="macro_restrict" type="target" label_type="Target" /> 46 <expand macro="macro_target_restrict" />
48 <expand macro="macro_include" /> 47 <expand macro="macro_include" />
49 <expand macro="macro_exclude" /> 48 <expand macro="macro_exclude" />
50 </section> 49 </section>
51 <section name="sec_plugin" expanded="true" title="Plugin Options"> 50 <section name="sec_plugin" expanded="true" title="Plugin Options">
52 <param name="phased" type="boolean" truevalue="--phased" falsevalue="" checked="false" label="Phased" help="Set to 0|0" /> 51 <param name="phased" type="boolean" truevalue="--phased" falsevalue="" checked="false" label="Phased" help="Set to 0|0" />