Mercurial > repos > iuc > bcftools_query

annotate test-data/filter.4.vcf @ 1:1fc5e47cb4a3 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit a9550d87541eda8b909e6aef1ad8cbf9e9e20d06
author iuc
date Wed, 13 Jul 2016 11:00:16 -0400
parents 2fea169065ec
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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diff changeset
1 ##fileformat=VCFv4.1
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
2 ##contig=<ID=chr1,length=135006516>
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
3 ##INFO=<ID=TEST1,Number=1,Type=Integer,Description="Test1">
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
4 ##INFO=<ID=TEST2,Number=1,Type=Float,Description="Test2">
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
5 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
6 ##FORMAT=<ID=TEST3,Number=1,Type=Integer,Description="Test3">
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
7 ##FORMAT=<ID=TEST4,Number=1,Type=Float,Description="Test4">
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample1 sample2
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
9 chr1 1 . A T 100 . TEST1=10;TEST2=10 GT:TEST3:TEST4 0/1:10:10 0/1:30:30
2fea169065ec planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff changeset
10 chr1 2 . A T 100 . TEST1=50;TEST2=50 GT:TEST3:TEST4 0/1:20:20 0/1:40:40