Mercurial > repos > iuc > bcftools_stats

comparison bcftools_stats.xml @ 13:c636e58df612 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit d5a01866d60f9775392420988259f1e79c464163"
author iuc
date Thu, 14 Oct 2021 10:03:31 +0000
parents 9c0028888512
children 80844da35ed5
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12:b17394940c7a 13:c636e58df612
1 <?xml version='1.0' encoding='utf-8'?> 1 <?xml version='1.0' encoding='utf-8'?>
2 <tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@" profile="18.01"> 2 <tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@+galaxy1" profile="18.01">
3 <description>Parses VCF or BCF and produces stats which can be plotted using plot-vcfstats</description> 3 <description>Parses VCF or BCF and produces stats which can be plotted using plot-vcfstats</description>
4 <expand macro="bio_tools" />
4 <macros> 5 <macros>
5 <token name="@EXECUTABLE@">stats</token> 6 <token name="@EXECUTABLE@">stats</token>
6 <import>macros.xml</import> 7 <import>macros.xml</import>
7 </macros> 8 </macros>
8 <expand macro="requirements"> 9 <expand macro="requirements">
9 <expand macro="samtools_requirement"/> 10 <expand macro="samtools_requirement"/>
10 <expand macro="matplotlib_requirement" /> 11 <expand macro="matplotlib_requirement" />
11 <requirement type="package" version="0.1.11">tectonic</requirement> 12 <requirement type="package" version="0.8.0">tectonic</requirement>
12 </expand> 13 </expand>
13 <expand macro="version_command" /> 14 <expand macro="version_command" />
14 <command detect_errors="aggressive"><![CDATA[ 15 <command detect_errors="aggressive"><![CDATA[
15 @PREPARE_ENV@ 16 @PREPARE_ENV@
16 #set $input_files = [$input_file] 17 #set $input_files = [$input_file]