Mercurial > repos > iuc > bcftools_view

view test-data/consensus.vcf @ 15:e1a2389af238 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit af43d9cf6824f88726900857116f333ff4cdd336"
author iuc
date Sat, 15 Jan 2022 13:31:19 +0000
parents 94f98eb08abc
children
line wrap: on
line source

##fileformat=VCFv4.2
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##ALT=<ID=DEL,Description="Deletion">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA001
1	5	.	C	a	.	PASS	.	GT	0/1
1	5	.	C	t	.	PASS	.	GT	0/1
1	7	.	T	a	.	PASS	.	GT	.
1	10	.	G	a	.	PASS	.	GT	0/1
1	12	.	GACA	ga	.	PASS	.	GT	0/1
1	16	.	T	taaa	.	PASS	.	GT	1/1
1	19	.	A	c	.	PASS	.	GT	0/1
1	61	.	C	a	.	PASS	.	GT	0/1
2	61	.	AGAG	aa	.	PASS	.	GT	0/1
2	119	.	AAA	t	.	PASS	.	GT	0/1
2	179	.	G	gacgtacgt	.	PASS	.	GT	0/1
2	200	.	A	<DEL>	.	PASS	END=210	GT	1/0
2	481	.	T	c,a	.	PASS	.	GT	0/2