Mercurial > repos > iuc > bedtools

comparison slopBed.xml @ 43:07e8b80f278c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
author iuc
date Fri, 01 Apr 2022 19:02:51 +0000
parents 7ab85ac5f64b
children 64e2edfe7a2c
comparison
equal deleted inserted replaced
42:841fb4dc3ab3 43:07e8b80f278c
1 <tool id="bedtools_slopbed" name="bedtools SlopBed" version="@TOOL_VERSION@" profile="@PROFILE@"> 1 <tool id="bedtools_slopbed" name="bedtools SlopBed" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
2 <description>adjust the size of intervals</description> 2 <description>adjust the size of intervals</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools" /> 6 <expand macro="bio_tools" />
8 <expand macro="stdio" /> 8 <expand macro="stdio" />
9 <command><![CDATA[ 9 <command><![CDATA[
10 bedtools slop 10 bedtools slop
11 $pct 11 $pct
12 $strand 12 $strand
13 -g @GENOME_FILE@ 13 @GENOME_FILE@
14 -i '$inputA' 14 -i '$inputA'
15 #if $addition.addition_select == 'b': 15 #if $addition.addition_select == 'b':
16 -b $addition.b 16 -b $addition.b
17 #else: 17 #else:
18 -l $addition.l 18 -l $addition.l