Mercurial > repos > iuc > bedtools

comparison bedToBam.xml @ 4:607c0576c6ab draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 6692e3a4fa1bf6e9a407735afdbb2454ed32b316
author iuc
date Wed, 27 Jan 2016 15:15:59 -0500
parents 82aac94b06c3
children 44867b59dbf2
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3:2cd7e321d259 4:607c0576c6ab
1 <tool id="bedtools_bedtobam" name="Convert from BED to BAM" version="@WRAPPER_VERSION@.0"> 1 <tool id="bedtools_bedtobam" name="BED to BAM" version="@WRAPPER_VERSION@.0">
2 <description></description> 2 <description>converter</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
7 <expand macro="stdio" /> 7 <expand macro="stdio" />
29 </outputs> 29 </outputs>
30 <tests> 30 <tests>
31 <test> 31 <test>
32 <param name="input" value="bedToBam1.bed" ftype="bed" /> 32 <param name="input" value="bedToBam1.bed" ftype="bed" />
33 <param name="genome" value="mm9_chr1.len" ftype="tabular" /> 33 <param name="genome" value="mm9_chr1.len" ftype="tabular" />
34 <output name="output" file="bedToBam_result.bam" lines_diff="2" ftype="bam" /> 34 <output name="output" file="bedToBam_result.bam" lines_diff="4" ftype="bam" />
35 </test> 35 </test>
36 </tests> 36 </tests>
37 <help> 37 <help>
38 <![CDATA[ 38 <![CDATA[
39 **What it does** 39 **What it does**