Mercurial > repos > iuc > bedtools

comparison maskFastaBed.xml @ 26:95a3b2c25bd1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59
author iuc
date Thu, 26 Apr 2018 17:02:46 -0400
parents a8eabd2838f6
children 4f7a5ccd2ae9
comparison
equal deleted inserted replaced
25:e36671a0f646 26:95a3b2c25bd1
15 -fo '${output}' 15 -fo '${output}'
16 $fullheader 16 $fullheader
17 ]]> 17 ]]>
18 </command> 18 </command>
19 <inputs> 19 <inputs>
20 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/> 20 <param format="@STD_BEDTOOLS_INPUTS@" name="input" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@ file"/>
21 <param format="fasta" name="fasta" type="data" label="Fasta file"/> 21 <param format="fasta" name="fasta" type="data" label="Fasta file"/>
22 <param name="soft" type="boolean" checked="false" truevalue="-soft" falsevalue="" 22 <param name="soft" type="boolean" checked="false" truevalue="-soft" falsevalue=""
23 label="Soft-mask (that is, convert to lower-case bases) the FASTA sequence" 23 label="Soft-mask (that is, convert to lower-case bases) the FASTA sequence"
24 help="By default, hard-masking (that is, conversion to Ns) is performed. (-soft)" /> 24 help="By default, hard-masking (that is, conversion to Ns) is performed. (-soft)" />
25 <param name="mc" type="text" value="N" 25 <param name="mc" type="text" value="N"