Mercurial > repos > iuc > bedtools

comparison groupbyBed.xml @ 47:2892111d91f8 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 73ebd55430874a3c1483b6dd6cce0482175482f9
author iuc
date Fri, 21 Feb 2025 21:40:09 +0000
parents 7ab85ac5f64b
children
comparison
equal deleted inserted replaced
46:64e2edfe7a2c 47:2892111d91f8
1 <tool id="bedtools_groupbybed" name="bedtools GroupByBed" version="@TOOL_VERSION@" profile="@PROFILE@"> 1 <tool id="bedtools_groupbybed" name="bedtools GroupByBed" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
2 <description>group by common cols and summarize other cols</description> 2 <description>group by common cols and summarize other cols</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools" /> 6 <expand macro="bio_tools" />
23 <sanitizer invalid_char=""> 23 <sanitizer invalid_char="">
24 <valid initial="string.digits"><add value=","/><add value="-"/></valid> 24 <valid initial="string.digits"><add value=","/><add value="-"/></valid>
25 </sanitizer> 25 </sanitizer>
26 </param> 26 </param>
27 <param name="operation" argument="-o" type="select" label="Specify the operation"> 27 <param name="operation" argument="-o" type="select" label="Specify the operation">
28 <!-- <option value="sum" selected="true">Sum - numeric only</option> This is already in math-->
29 <option value="stdev">Stdev - numeric only</option>
30 <option value="sstdev">Sstdev - numeric only</option>
31 <option value="freqasc">Freqasc - comma separated list of values observed and the number of times they were observed (ascending)</option> 28 <option value="freqasc">Freqasc - comma separated list of values observed and the number of times they were observed (ascending)</option>
32 <option value="freqdesc">Freqdesc - comma separated list of values observed and the number of times they were observed (descending)</option> 29 <option value="freqdesc">Freqdesc - comma separated list of values observed and the number of times they were observed (descending)</option>
33 <option value="first">First - numeric or text</option>
34 <option value="last">Last - numeric or text</option>
35 <expand macro="math_options" /> 30 <expand macro="math_options" />
36 <expand macro="additional_math_options" /> 31 <expand macro="additional_math_options" />
37 </param> 32 </param>
38 </inputs> 33 </inputs>
39 <outputs> 34 <outputs>