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comparison intersectBed.xml @ 46:64e2edfe7a2c draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 3e7bf5ae62de3520635d75e3825701960b9722e4
author iuc
date Sat, 18 May 2024 23:28:38 +0000
parents 07e8b80f278c
children
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45:a1a923cd89e8 46:64e2edfe7a2c
1 <tool id="bedtools_intersectbed" name="bedtools Intersect intervals" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> 1 <tool id="bedtools_intersectbed" name="bedtools Intersect intervals" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
2 <description>find overlapping intervals in various ways</description> 2 <description>find overlapping intervals in various ways</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools" /> 6 <expand macro="bio_tools" />
7 <expand macro="requirements"> 7 <expand macro="requirements">
8 <requirement type="package" version="@SAMTOOLS_VERSION@">samtools</requirement> 8 <requirement type="package" version="1.18">samtools</requirement>
9 </expand> 9 </expand>
10 <expand macro="stdio" /> 10 <expand macro="stdio" />
11 <command><![CDATA[ 11 <command><![CDATA[
12 #import re 12 #import re
13 #set modes = ' '.join(str($overlap_mode).split(',')) 13 #set modes = ' '.join(str($overlap_mode).split(','))