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comparison unionBedGraphs.xml @ 47:2892111d91f8 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 73ebd55430874a3c1483b6dd6cce0482175482f9
author iuc
date Fri, 21 Feb 2025 21:40:09 +0000
parents 7ab85ac5f64b
children
comparison
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46:64e2edfe7a2c 47:2892111d91f8
64 <outputs> 64 <outputs>
65 <data name="output" format="bedgraph" /> 65 <data name="output" format="bedgraph" />
66 </outputs> 66 </outputs>
67 <tests> 67 <tests>
68 <test> 68 <test>
69 <param name="tag_select" value="tag" /> 69 <param name="tag|tag_select" value="tag" />
70 <param name="inputs" value="unionBedGraphs1.bg,unionBedGraphs2.bg,unionBedGraphs3.bg" ftype="bedgraph" /> 70 <param name="tag|inputs" value="unionBedGraphs1.bg,unionBedGraphs2.bg,unionBedGraphs3.bg" ftype="bedgraph" />
71 <param name="empty_selector" value="" /> 71 <param name="empty|empty_selector" value="" />
72 <output name="output" file="unionBedGraphs_result1.bg" ftype="bedgraph" /> 72 <output name="output" file="unionBedGraphs_result1.bg" ftype="bedgraph" />
73 </test> 73 </test>
74 <test> 74 <test>
75 <param name="tag_select" value="tag" /> 75 <param name="tag|tag_select" value="tag" />
76 <param name="inputs" value="unionBedGraphs1.bg,unionBedGraphs2.bg,unionBedGraphs3.bg" ftype="bedgraph" /> 76 <param name="tag|inputs" value="unionBedGraphs1.bg,unionBedGraphs2.bg,unionBedGraphs3.bg" ftype="bedgraph" />
77 <param name="header" value="True" /> 77 <param name="header" value="true" />
78 <param name="empty_selector" value="" /> 78 <param name="empty|empty_selector" value="" />
79 <output name="output" file="unionBedGraphs_result2.bg" ftype="bedgraph" /> 79 <output name="output" file="unionBedGraphs_result2.bg" ftype="bedgraph" />
80 </test> 80 </test>
81 <test> 81 <test>
82 <param name="tag_select" value="tag" /> 82 <param name="tag|tag_select" value="tag" />
83 <param name="inputs" value="unionBedGraphs1.bg,unionBedGraphs2.bg,unionBedGraphs3.bg" ftype="bedgraph" /> 83 <param name="tag|inputs" value="unionBedGraphs1.bg,unionBedGraphs2.bg,unionBedGraphs3.bg" ftype="bedgraph" />
84 <param name="empty_selector" value="-empty" /> 84 <param name="empty|empty_selector" value="-empty" />
85 <param name="genome_file_opts_selector" value="hist" /> 85 <param name="empty|genome_file_opts|genome_file_opts_selector" value="hist" />
86 <param name="genome" value="unionBedGraphs1.len" ftype="tabular" /> 86 <param name="empty|genome_file_opts|genome" value="unionBedGraphs1.len" ftype="tabular" />
87 <output name="output" file="unionBedGraphs_result3.bg" ftype="bedgraph" /> 87 <output name="output" file="unionBedGraphs_result3.bg" ftype="bedgraph" />
88 </test> 88 </test>
89 <test> 89 <test>
90 <param name="tag_select" value="custom" /> 90 <param name="tag|tag_select" value="custom" />
91 <repeat name="bedgraphs"> 91 <repeat name="tag|bedgraphs">
92 <param name="input" value="unionBedGraphs1.bg" ftype="bedgraph" /> 92 <param name="input" value="unionBedGraphs1.bg" ftype="bedgraph" />
93 <param name="custom_name" value="first" /> 93 <param name="custom_name" value="first" />
94 </repeat> 94 </repeat>
95 <repeat name="bedgraphs"> 95 <repeat name="tag|bedgraphs">
96 <param name="input" value="unionBedGraphs2.bg" ftype="bedgraph" /> 96 <param name="input" value="unionBedGraphs2.bg" ftype="bedgraph" />
97 <param name="custom_name" value="second" /> 97 <param name="custom_name" value="second" />
98 </repeat> 98 </repeat>
99 <repeat name="bedgraphs"> 99 <repeat name="tag|bedgraphs">
100 <param name="input" value="unionBedGraphs3.bg" ftype="bedgraph" /> 100 <param name="input" value="unionBedGraphs3.bg" ftype="bedgraph" />
101 <param name="custom_name" value="third" /> 101 <param name="custom_name" value="third" />
102 </repeat> 102 </repeat>
103 <param name="empty_selector" value="-empty" /> 103 <param name="empty|empty_selector" value="-empty" />
104 <param name="genome_file_opts_selector" value="hist" /> 104 <param name="empty|genome_file_opts|genome_file_opts_selector" value="hist" />
105 <param name="genome" value="unionBedGraphs1.len" ftype="tabular" /> 105 <param name="empty|genome_file_opts|genome" value="unionBedGraphs1.len" ftype="tabular" />
106 <output name="output" file="unionBedGraphs_result4.bg" ftype="bedgraph" /> 106 <output name="output" file="unionBedGraphs_result4.bg" ftype="bedgraph" />
107 </test> 107 </test>
108 </tests> 108 </tests>
109 <help><![CDATA[ 109 <help><![CDATA[
110 **What it does** 110 **What it does**