Mercurial > repos > iuc > bedtools
diff test-data/all_gff.loc @ 43:07e8b80f278c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
| author | iuc |
|---|---|
| date | Fri, 01 Apr 2022 19:02:51 +0000 |
| parents | |
| children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/all_gff.loc Fri Apr 01 19:02:51 2022 +0000 @@ -0,0 +1,15 @@ +#This file lists the locations and dbkeys of all the GFF files +#This file has the format (white space characters are +#TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <file_path> +# +#So, all_gff.loc could look something like this: +# +#apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/annotation/apiMel3/apiMel3.gff +#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/annotation/hg19/hg19canon.gff +#hg19full hg19 Human (Homo sapiens): hg19 Representative transcripts /path/to/annotation/hg19/hg19_representative_tx.gff +# +#Your all_gff.loc file should contain an entry for each different annotation. +#So there can be multiple gff files for each build, such as with hg19 above. +testid testdbkey testdisplay ${__HERE__}/a.bed