Mercurial > repos > iuc > bedtools
diff randomBed.xml @ 2:457b09031d57 draft
Uploaded
author | iuc |
---|---|
date | Tue, 19 May 2015 07:05:36 -0400 |
parents | 82aac94b06c3 |
children | 607c0576c6ab |
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--- a/randomBed.xml Thu Jan 08 14:25:51 2015 -0500 +++ b/randomBed.xml Tue May 19 07:05:36 2015 -0400 @@ -11,7 +11,7 @@ -g $genome -l $length -n $intervals - #if $seed.seed_choose: + #if str($seed.seed_choose) == "True": -seed $seed.seed #end if > "$output" @@ -29,11 +29,15 @@ <tests> <test> <param name="genome" value="mm9_chr1.len" /> - <param name="seed_choose" value="True" /> - <param name="seed" value="1" /> + <param name="seed_choose" value="False" /> <param name="length" value="5" /> <param name="intervals" value="3" /> - <output name="output" file="randomBed_result1.bed" ftype="bed" /> + <output name="output"> + <assert_contents> + <has_text_matching expression="chr1" /> + <has_n_columns n="6" /> + </assert_contents> + </output> </test> </tests> <help>