Mercurial > repos > iuc > bedtools

diff mergeBed.xml @ 11:7308cc546a36 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:35 -0400
parents 607c0576c6ab
children 95a3b2c25bd1
line wrap: on
line diff
--- a/mergeBed.xml	Mon Oct 03 07:36:08 2016 -0400
+++ b/mergeBed.xml	Mon Oct 17 10:13:35 2016 -0400
@@ -1,4 +1,4 @@
-<tool id="bedtools_mergebed" name="MergeBED" version="@WRAPPER_VERSION@.1">
+<tool id="bedtools_mergebed" name="MergeBED" version="@WRAPPER_VERSION@.0">
     <description>combine overlapping/nearby intervals into a single interval</description>
     <macros>
         <import>macros.xml</import>
@@ -120,12 +120,12 @@
 
 
 ==========================================================================
-*-d* Controlling how close two features must be in order to merge 
+*-d* Controlling how close two features must be in order to merge
 ==========================================================================
-By default, only overlapping or book-ended features are combined into a new 
-feature. However, one can force ``merge`` to combine more distant features 
-with the ``-d`` option. For example, were one to set ``-d`` to 1000, any 
-features that overlap or are within 1000 base pairs of one another will be 
+By default, only overlapping or book-ended features are combined into a new
+feature. However, one can force ``merge`` to combine more distant features
+with the ``-d`` option. For example, were one to set ``-d`` to 1000, any
+features that overlap or are within 1000 base pairs of one another will be
 combined.
 
 ::
@@ -133,7 +133,7 @@
   $ cat A.bed
   chr1  100  200
   chr1  501  1000
-  
+
   $ bedtools merge -i A.bed
   chr1  100  200
   chr1  501  1000