Mercurial > repos > iuc > bedtools

diff tagBed.xml @ 26:95a3b2c25bd1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59
author iuc
date Thu, 26 Apr 2018 17:02:46 -0400
parents 607c0576c6ab
children 4f7a5ccd2ae9
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--- a/tagBed.xml	Fri Apr 20 05:30:23 2018 -0400
+++ b/tagBed.xml	Thu Apr 26 17:02:46 2018 -0400
@@ -20,7 +20,7 @@
     </command>
     <inputs>
         <param name="inputA" format="bam" type="data" label="BAM file"/>
-        <param name="inputB" format="bed,gff,vcf" multiple="True" type="data" label="BED/VCF/GFF file" />
+        <param name="inputB" format="@STD_BEDTOOLS_INPUTS@" multiple="True" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@ file" />
         <expand macro="strand2" />
         <expand macro="overlap" />
         <param name="tag" type="text" value="YB" label="Specify the tag to use" />
@@ -46,7 +46,7 @@
 <![CDATA[
 **What it does**
 
-Annotates a BAM file based on overlaps with multiple BED/GFF/VCF files on the intervals in an input bam file
+Annotates a BAM file based on overlaps with multiple @STD_BEDTOOLS_INPUT_LABEL@ files on the intervals in an input bam file
 
 @REFERENCES@
 ]]>