Mercurial > repos > iuc > bedtools
view tool-data/dbkeys.loc.sample @ 26:95a3b2c25bd1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59
author | iuc |
---|---|
date | Thu, 26 Apr 2018 17:02:46 -0400 |
parents | 44867b59dbf2 |
children |
line wrap: on
line source
#This file lists the locations and dbkeys of all the genome files #See here for details: http://bedtools.readthedocs.io/en/latest/content/general-usage.html#genome-file-format #You can add elements to this data table using the data_manager_fetch_genome_dbkeys_all_fasta data manager. #Alternatively, index files created using samtools faidx (http://www.htslib.org/doc/faidx.html) contain 3 extra columns, but work fine. #This file has the format (white space characters are TAB characters): # #<dbkey> <display_name> <file_path> # #So, dbkeys.loc could look something like this: # #apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.len #hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.len #