Mercurial > repos > iuc > bedtools
view randomBed.xml @ 0:b8348686a0b9 draft
Imported from capsule None
author | iuc |
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date | Tue, 04 Nov 2014 01:45:04 -0500 |
parents | |
children | 82aac94b06c3 |
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<tool id="bedtools_randombed" name="RandomBed" version="@WRAPPER_VERSION@.0"> <description></description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <expand macro="stdio" /> <command> bedtools random -g $genome -l $length -n $intervals #if $seed.choose: -seed $seed.seed #end if </command> <inputs> <expand macro="genome" /> <param name="length" type="integer" value="100" label="The length of the intervals to generate." /> <param name="intervals" type="integer" value="1000000" label="The number of intervals to generate." /> <expand macro="seed" /> </inputs> <outputs> <data format="bed" name="output" /> </outputs> <help> **What it does** bedtools random will generate a random set of intervals in BED6 format. One can specify both the number (-n) and the size (-l) of the intervals that should be generated. @REFERENCES@ </help> <expand macro="citations" /> </tool>