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comparison macros.xml @ 0:e13169dca7c8 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/naltorfs/ commit cbedf7b5968b45a08df88d4ad799951d6f50a2bd"
author iuc
date Mon, 11 Apr 2022 20:36:48 +0000
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-1:000000000000 0:e13169dca7c8
1 <macros>
2 <token name="@TOOL_VERSION@">0.1.2</token>
3 <xml name="requirements">
4 <requirements>
5 <requirement type="package" version="@TOOL_VERSION@">naltorfs</requirement>
6 <yield/>
7 </requirements>
8 </xml>
9 <xml name="translation_table_select_parameter">
10 <param argument="--translation_table" type="select" label="Translation table">
11 <option value="1" selected="true">Table 1 Standard, SGC0</option>
12 <option value="2">Table 2 Vertebrate Mitochondrial, SGC1</option>
13 <option value="3">Table 3 Yeast Mitochondrial, SGC2</option>
14 <option value="4">Table 4 Mold Mitochondrial, Protozoan Mitochondrial, Coelenterate Mitochondrial, Mycoplasma, Spiroplasma, SGC3</option>
15 <option value="5">Table 5 Invertebrate Mitochondrial, SGC4</option>
16 <option value="6">Table 6 Ciliate Nuclear, Dasycladacean Nuclear, Hexamita Nuclear, SGC5</option>
17 <option value="9">Table 9 Echinoderm Mitochondrial, Flatworm Mitochondrial, SGC8</option>
18 <option value="10">Table 10 Euplotid Nuclear, SGC9</option>
19 <option value="11">Table 11 Bacterial, Archaeal, Plant Plastid</option>
20 <option value="12">Table 12 Alternative Yeast Nuclear</option>
21 <option value="13">Table 13 Ascidian Mitochondrial</option>
22 <option value="14">Table 14 Alternative Flatworm Mitochondrial</option>
23 <option value="15">Table 15 Blepharisma Macronuclear</option>
24 <option value="16">Table 16 Chlorophycean Mitochondrial</option>
25 <option value="21">Table 21 Trematode Mitochondrial</option>
26 <option value="22">Table 22 Scenedesmus obliquus Mitochondrial</option>
27 <option value="23">Table 23 Thraustochytrium Mitochondrial</option>
28 <option value="24">Table 24 Pterobranchia Mitochondrial</option>
29 <option value="25">Table 25 Candidate Division SR1, Gracilibacteria</option>
30 <option value="26">Table 26 Pachysolen tannophilus Nuclear</option>
31 <option value="27">Table 27 Karyorelict Nuclear</option>
32 <option value="28">Table 28 Condylostoma Nuclear</option>
33 <option value="29">Table 29 Mesodinium Nuclear</option>
34 <option value="30">Table 30 Peritrich Nuclear</option>
35 <option value="31">Table 31 Blastocrithidia Nuclear</option>
36 <option value="32">Table 32 Balanophoraceae Plastid</option>
37 <option value="33">Table 33 Cephalodiscidae Mitochondrial</option>
38 </param>
39 </xml>
40 <xml name="edam_ontology">
41 <edam_topics>
42 <edam_topic>topic_0622</edam_topic>
43 <edam_topic>topic_0091</edam_topic>
44 </edam_topics>
45 <edam_operations>
46 <edam_operation>operation_0286</edam_operation>
47 <edam_operation>operation_0284</edam_operation>
48 <edam_operation>operation_0436</edam_operation>
49 <edam_operation>operation_0362</edam_operation>
50 </edam_operations>
51 </xml>
52 <xml name="citations">
53 <citations>
54 <citation type="bibtex">
55 @UNPUBLISHED{nAltORFs,
56 author = "Kommireddy Vasu and Debjit Khan and Iyappan Ramachandiran and Daniel Blankenberg and Paul L. Fox",
57 title = "Nested Alternate Open Reading Frames and their Encoded Proteins: The Hidden Orfeome",
58 year = "2022"
59 }
60 </citation>
61 </citations>
62 </xml>
63 </macros>