Mercurial > repos > iuc > bioext_bam2msa

comparison bam2msa.xml @ 3:b226e0c805a5 draft

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"planemo upload for repository https://github.com/davebx/bioext-gx/ commit af3bfbbd3f1236bf96a25bcb8483f2889295ec0c"
author iuc
date Fri, 20 Aug 2021 21:03:56 +0000
parents 0a4ad829d87a
children a68cb16fa1a0
comparison
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2:0a4ad829d87a 3:b226e0c805a5
21 <outputs> 21 <outputs>
22 <data name="output" format="fasta"/> 22 <data name="output" format="fasta"/>
23 </outputs> 23 </outputs>
24 <tests> 24 <tests>
25 <test> 25 <test>
26 <param name="input" ftype="bam" value="bealign-out1.bam"/> 26 <param name="input" ftype="bam" value="bam2msa-in1.bam"/>
27 <output name="output" file="bam2msa-out1.fa"/> 27 <output name="output" file="bam2msa-out1.fa"/>
28 </test> 28 </test>
29 <test> 29 <test>
30 <param name="input" ftype="bam" value="bealign-out2.bam"/> 30 <param name="input" ftype="bam" value="bam2msa-in2.bam"/>
31 <output name="output" file="bam2msa-out2.fa"/> 31 <output name="output" file="bam2msa-out2.fa"/>
32 </test> 32 </test>
33 </tests> 33 </tests>
34 <help>Extract MSA from a BAM file</help> 34 <help>Extract MSA from a BAM file</help>
35 <expand macro="citations"/> 35 <expand macro="citations"/>