Mercurial > repos > iuc > bioext_bam2msa
view macros.xml @ 6:27202050e185 draft
"planemo upload for repository https://github.com/davebx/bioext-gx/ commit c21521441846e419a69366ee10a30aa828573095"
author | iuc |
---|---|
date | Fri, 29 Oct 2021 18:12:00 +0000 |
parents | b226e0c805a5 |
children | 359e043a285c |
line wrap: on
line source
<?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">0.20.2</token> <token name="@PROFILE@">20.05</token> <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">python-bioext</requirement> <yield /> </requirements> </xml> <xml name="citations"> <citations> <citation type="bibtex"> @UNPUBLISHED{spond, author = "Sergei Kosakovsky Pond", title = "HyPhy: Hypothesis Testing using Phylogenies", year = "2000", note = "http://hyphy.org/", url = "http://hyphy.org/"} </citation> </citations> </xml> </macros>