Mercurial > repos > iuc > bioext_bam2msa
view macros.xml @ 10:767943cd85bf draft default tip
planemo upload for repository https://github.com/davebx/bioext-gx/ commit a7729ad7789e8b120055a9a9b53494acb826b371
author | iuc |
---|---|
date | Mon, 02 Sep 2024 10:14:57 +0000 |
parents | 7ecb45126cd2 |
children |
line wrap: on
line source
<?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">0.21.9</token> <token name="@VERSION_SUFFIX@">0</token> <token name="@PROFILE@">22.05</token> <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">python-bioext</requirement> <yield /> </requirements> </xml> <xml name="citations"> <citations> <citation type="bibtex"> @UNPUBLISHED{spond, author = "Sergei Kosakovsky Pond", title = "HyPhy: Hypothesis Testing using Phylogenies", year = "2000", note = "http://hyphy.org/", url = "http://hyphy.org/"} </citation> </citations> </xml> </macros>