# HG changeset patch # User iuc # Date 1635531090 0 # Node ID c239e93d9f04e154efb017735fb3825a26623db5 # Parent a287431cdf4f4a7c73ba253e77a52555668989d9 "planemo upload for repository https://github.com/davebx/bioext-gx/ commit c21521441846e419a69366ee10a30aa828573095" diff -r a287431cdf4f -r c239e93d9f04 bealign.xml --- a/bealign.xml Tue Oct 05 09:52:56 2021 +0000 +++ b/bealign.xml Fri Oct 29 18:11:30 2021 +0000 @@ -3,11 +3,11 @@ to a reference using a codon alignment algorithm macros.xml - 2 + 0 gawk - samtools + samtools bealign --version diff -r a287431cdf4f -r c239e93d9f04 macros.xml --- a/macros.xml Tue Oct 05 09:52:56 2021 +0000 +++ b/macros.xml Fri Oct 29 18:11:30 2021 +0000 @@ -1,6 +1,6 @@ - 0.20.1 + 0.20.2 20.05 ]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]>