Mercurial > repos > iuc > biom_add_metadata

changeset 8:6ef0b5664c69 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/biom_format commit 4d77c1e4bd9f6876ee338858a8cd4c7e9528d54c
author iuc
date Wed, 13 Sep 2023 18:53:16 +0000
parents 0b3c3ad92827
children dad9da48a09a
files biom_add_metadata.xml macros.xml
diffstat 2 files changed, 11 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- a/biom_add_metadata.xml	Sat Jan 21 11:16:40 2023 +0000
+++ b/biom_add_metadata.xml	Wed Sep 13 18:53:16 2023 +0000
@@ -38,16 +38,16 @@
         ]]>
     </command>
     <inputs>
-        <param name="input_fp" argument="--input-fp" type="data" format="biom1" label="BIOM File"/>
-        <param name="sample_metadata_fp" argument="--sample-metadata-fp" type="data" format="tabular" optional="True" label="Sample Metadata Tabular File" />
-        <param name="observation_metadata_fp" argument="--observation-metadata-fp" type="data" format="tabular" optional="True" label="Observation Metadata Tabular File"/>
-        <param name="sc_separated" argument="--sc-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons" />
-        <param name="sc_pipe_separated" argument="--sc-pipe-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons and pipes (|)"/>
-        <param name="int_fields" argument="--int-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to integers" />
-        <param name="float_fields" argument="--float-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to floating point numbers" />
-        <param name="sample_header" argument="--sample-header" type="text" value="" label="Comma-separated list of the sample metadata field names" />
-        <param name="observation_header" argument="--observation-header" type="text" value="" label="Comma-separated list of the observation metadata field names" />
-        <param name="output_as_json" argument="--output-as-json" type="boolean" checked="True" truevalue="--output-as-json" falsevalue="" label="Write the output file in JSON format (biom1)" />
+        <param argument="--input-fp" type="data" format="biom1" label="BIOM File"/>
+        <param argument="--sample-metadata-fp" type="data" format="tabular" optional="True" label="Sample Metadata Tabular File" />
+        <param argument="--observation-metadata-fp" type="data" format="tabular" optional="True" label="Observation Metadata Tabular File"/>
+        <param argument="--sc-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons" />
+        <param argument="--sc-pipe-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons and pipes (|)"/>
+        <param argument="--int-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to integers" />
+        <param argument="--float-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to floating point numbers" />
+        <param argument="--sample-header" type="text" value="" label="Comma-separated list of the sample metadata field names" />
+        <param argument="--observation-header" type="text" value="" label="Comma-separated list of the observation metadata field names" />
+        <param argument="--output-as-json" type="boolean" checked="True" truevalue="--output-as-json" falsevalue="" label="Write the output file in JSON format (biom1)" />
     </inputs>
     <outputs>
         <data format="biom1" name="output_fp">
--- a/macros.xml	Sat Jan 21 11:16:40 2023 +0000
+++ b/macros.xml	Wed Sep 13 18:53:16 2023 +0000
@@ -6,7 +6,7 @@
         </requirements>
     </xml>
     <token name="@TOOL_VERSION@">2.1.14</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@PROFILE@">21.05</token>
     <xml name="version_command">
         <version_command>biom --version</version_command>