Mercurial > repos > iuc > biotradis

annotate test-data/test.csv.all.csv @ 0:738e58ed9cc2 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
author iuc
date Wed, 29 Jan 2020 10:41:06 -0500
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738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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1 locus_tag,gene_name,ncrna,start,end,strand,read_count,ins_index,gene_length,ins_count,fcn
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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2 BW25113_0001,thrL,0,190,255,1,44,0.181818181818182,66,12,thr operon leader peptide
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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3 BW25113_0002,thrA,0,337,2799,1,969,0.135200974421437,2463,333,Bifunctional aspartokinase/homoserine dehydrogenase 1
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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4 BW25113_0003,thrB,0,2801,3733,1,423,0.170418006430868,933,159,homoserine kinase
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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5 BW25113_0004,thrC,0,3734,5020,1,518,0.136752136752137,1287,176,L-threonine synthase
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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6 BW25113_0005,yaaX,0,5234,5530,1,155,0.151515151515152,297,45,DUF2502 family putative periplasmic protein
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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7 BW25113_0006,yaaA,0,5683,6459,-1,293,0.141570141570142,777,110,peroxide resistance protein, lowers intracellular iron
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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8 BW25113_0007,yaaJ,0,6529,7959,-1,600,0.140461215932914,1431,201,putative transporter
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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9 BW25113_0008,talB,0,8238,9191,1,492,0.161425576519916,954,154,transaldolase B
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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10 BW25113_0009,mog,0,9306,9893,1,239,0.158163265306122,588,93,molybdochelatase incorporating molybdenum into molybdopterin
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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11 BW25113_0010,satP,0,9928,10494,-1,306,0.194003527336861,567,110,succinate-acetate transporter
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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12 BW25113_0011,yaaW,0,10643,11356,-1,245,0.138655462184874,714,99,UPF0174 family protein
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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13 BW25113_0013,yaaI,0,11382,11786,-1,270,0.17037037037037,405,69,UPF0412 family protein
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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14 BW25113_0014,dnaK,0,12163,14079,1,96,0.0276473656755347,1917,53,chaperone Hsp70, with co-chaperone DnaJ
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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15 BW25113_0015,dnaJ,0,14168,15298,1,436,0.138815207780725,1131,157,chaperone Hsp40, DnaK co-chaperone
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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16 BW25113_0016,insL1,0,15445,16557,1,333,0.153638814016173,1113,171,IS186 transposase
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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17 BW25113_0018,mokC,0,16751,16960,-1,350,0.304761904761905,210,64,regulatory protein for HokC, overlaps CDS of hokC
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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18 BW25113_4412,hokC,0,16751,16903,-1,107,0.196078431372549,153,30,toxic membrane protein, small
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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19 BW25113_4413,sokC,0,16952,17006,1,124,0.4,55,22,
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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20 BW25113_0019,nhaA,0,17489,18655,1,498,0.162810625535561,1167,190,sodium-proton antiporter
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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21 BW25113_0020,nhaR,0,18715,19620,1,473,0.183222958057395,906,166,transcriptional activator of nhaA
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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22 BW25113_0021,insB1,0,19811,20314,-1,68,0.0615079365079365,504,31,IS1 transposase B
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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23 BW25113_0022,insA,0,20233,20508,-1,30,0.0434782608695652,276,12,IS1 repressor TnpA
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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24 BW25113_0023,rpsT,0,20815,21078,-1,1,0.00378787878787879,264,1,30S ribosomal subunit protein S20
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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25 BW25113_0024,yaaY,0,21181,21399,1,32,0.0547945205479452,219,12,uncharacterized protein
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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26 BW25113_0025,ribF,0,21407,22348,1,8,0.00318471337579618,942,3,bifunctional riboflavin kinase/FAD synthetase
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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27 BW25113_0026,ileS,0,22391,25207,1,14,0.0035498757543486,2817,10,isoleucyl-tRNA synthetase