Mercurial > repos > iuc > biotradis

annotate test-data/test.csv @ 5:8e4a4f240961 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 5aac8c4c9990e8796c8a4c55d6c900c03e6db3c0
author iuc
date Wed, 13 Mar 2024 14:56:52 +0000
parents 738e58ed9cc2
children
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738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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1 locus_tag gene_name ncrna start end strand read_count ins_index gene_length ins_count fcn
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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2 BW25113_0001 thrL 0 190 255 1 44 0.181818181818182 66 12 "thr operon leader peptide"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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3 BW25113_0002 thrA 0 337 2799 1 969 0.135200974421437 2463 333 "Bifunctional aspartokinase/homoserine dehydrogenase 1"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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4 BW25113_0003 thrB 0 2801 3733 1 423 0.170418006430868 933 159 "homoserine kinase"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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5 BW25113_0004 thrC 0 3734 5020 1 518 0.136752136752137 1287 176 "L-threonine synthase"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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6 BW25113_0005 yaaX 0 5234 5530 1 155 0.151515151515152 297 45 "DUF2502 family putative periplasmic protein"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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7 BW25113_0006 yaaA 0 5683 6459 -1 293 0.141570141570142 777 110 "peroxide resistance protein, lowers intracellular iron"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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8 BW25113_0007 yaaJ 0 6529 7959 -1 600 0.140461215932914 1431 201 "putative transporter"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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9 BW25113_0008 talB 0 8238 9191 1 492 0.161425576519916 954 154 "transaldolase B"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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10 BW25113_0009 mog 0 9306 9893 1 239 0.158163265306122 588 93 "molybdochelatase incorporating molybdenum into molybdopterin"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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11 BW25113_0010 satP 0 9928 10494 -1 306 0.194003527336861 567 110 "succinate-acetate transporter"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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12 BW25113_0011 yaaW 0 10643 11356 -1 245 0.138655462184874 714 99 "UPF0174 family protein"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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13 BW25113_0013 yaaI 0 11382 11786 -1 270 0.17037037037037 405 69 "UPF0412 family protein"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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14 BW25113_0014 dnaK 0 12163 14079 1 96 0.0276473656755347 1917 53 "chaperone Hsp70, with co-chaperone DnaJ"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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15 BW25113_0015 dnaJ 0 14168 15298 1 436 0.138815207780725 1131 157 "chaperone Hsp40, DnaK co-chaperone"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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16 BW25113_0016 insL1 0 15445 16557 1 333 0.153638814016173 1113 171 "IS186 transposase"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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17 BW25113_0018 mokC 0 16751 16960 -1 350 0.304761904761905 210 64 "regulatory protein for HokC, overlaps CDS of hokC"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
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18 BW25113_4412 hokC 0 16751 16903 -1 107 0.196078431372549 153 30 "toxic membrane protein, small"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
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19 BW25113_4413 sokC 0 16952 17006 1 124 0.4 55 22
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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20 BW25113_0019 nhaA 0 17489 18655 1 498 0.162810625535561 1167 190 "sodium-proton antiporter"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
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21 BW25113_0020 nhaR 0 18715 19620 1 473 0.183222958057395 906 166 "transcriptional activator of nhaA"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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22 BW25113_0021 insB1 0 19811 20314 -1 68 0.0615079365079365 504 31 "IS1 transposase B"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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23 BW25113_0022 insA 0 20233 20508 -1 30 0.0434782608695652 276 12 "IS1 repressor TnpA"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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24 BW25113_0023 rpsT 0 20815 21078 -1 1 0.00378787878787879 264 1 "30S ribosomal subunit protein S20"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
iuc
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25 BW25113_0024 yaaY 0 21181 21399 1 32 0.0547945205479452 219 12 "uncharacterized protein"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
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26 BW25113_0025 ribF 0 21407 22348 1 8 0.00318471337579618 942 3 "bifunctional riboflavin kinase/FAD synthetase"
738e58ed9cc2 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
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27 BW25113_0026 ileS 0 22391 25207 1 14 0.0035498757543486 2817 10 "isoleucyl-tRNA synthetase"