Mercurial > repos > iuc > biotradis
diff test-data/test.csv @ 0:738e58ed9cc2 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
| author | iuc |
|---|---|
| date | Wed, 29 Jan 2020 10:41:06 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test.csv Wed Jan 29 10:41:06 2020 -0500 @@ -0,0 +1,27 @@ +locus_tag gene_name ncrna start end strand read_count ins_index gene_length ins_count fcn +BW25113_0001 thrL 0 190 255 1 44 0.181818181818182 66 12 "thr operon leader peptide" +BW25113_0002 thrA 0 337 2799 1 969 0.135200974421437 2463 333 "Bifunctional aspartokinase/homoserine dehydrogenase 1" +BW25113_0003 thrB 0 2801 3733 1 423 0.170418006430868 933 159 "homoserine kinase" +BW25113_0004 thrC 0 3734 5020 1 518 0.136752136752137 1287 176 "L-threonine synthase" +BW25113_0005 yaaX 0 5234 5530 1 155 0.151515151515152 297 45 "DUF2502 family putative periplasmic protein" +BW25113_0006 yaaA 0 5683 6459 -1 293 0.141570141570142 777 110 "peroxide resistance protein, lowers intracellular iron" +BW25113_0007 yaaJ 0 6529 7959 -1 600 0.140461215932914 1431 201 "putative transporter" +BW25113_0008 talB 0 8238 9191 1 492 0.161425576519916 954 154 "transaldolase B" +BW25113_0009 mog 0 9306 9893 1 239 0.158163265306122 588 93 "molybdochelatase incorporating molybdenum into molybdopterin" +BW25113_0010 satP 0 9928 10494 -1 306 0.194003527336861 567 110 "succinate-acetate transporter" +BW25113_0011 yaaW 0 10643 11356 -1 245 0.138655462184874 714 99 "UPF0174 family protein" +BW25113_0013 yaaI 0 11382 11786 -1 270 0.17037037037037 405 69 "UPF0412 family protein" +BW25113_0014 dnaK 0 12163 14079 1 96 0.0276473656755347 1917 53 "chaperone Hsp70, with co-chaperone DnaJ" +BW25113_0015 dnaJ 0 14168 15298 1 436 0.138815207780725 1131 157 "chaperone Hsp40, DnaK co-chaperone" +BW25113_0016 insL1 0 15445 16557 1 333 0.153638814016173 1113 171 "IS186 transposase" +BW25113_0018 mokC 0 16751 16960 -1 350 0.304761904761905 210 64 "regulatory protein for HokC, overlaps CDS of hokC" +BW25113_4412 hokC 0 16751 16903 -1 107 0.196078431372549 153 30 "toxic membrane protein, small" +BW25113_4413 sokC 0 16952 17006 1 124 0.4 55 22 +BW25113_0019 nhaA 0 17489 18655 1 498 0.162810625535561 1167 190 "sodium-proton antiporter" +BW25113_0020 nhaR 0 18715 19620 1 473 0.183222958057395 906 166 "transcriptional activator of nhaA" +BW25113_0021 insB1 0 19811 20314 -1 68 0.0615079365079365 504 31 "IS1 transposase B" +BW25113_0022 insA 0 20233 20508 -1 30 0.0434782608695652 276 12 "IS1 repressor TnpA" +BW25113_0023 rpsT 0 20815 21078 -1 1 0.00378787878787879 264 1 "30S ribosomal subunit protein S20" +BW25113_0024 yaaY 0 21181 21399 1 32 0.0547945205479452 219 12 "uncharacterized protein" +BW25113_0025 ribF 0 21407 22348 1 8 0.00318471337579618 942 3 "bifunctional riboflavin kinase/FAD synthetase" +BW25113_0026 ileS 0 22391 25207 1 14 0.0035498757543486 2817 10 "isoleucyl-tRNA synthetase"