diff test-data/tiny_ref.embl @ 0:738e58ed9cc2 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/biotradis commit 1c0a0f88149bf8863a89c58bace81e070b3adb5a"
author iuc
date Wed, 29 Jan 2020 10:41:06 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
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+ID   CP009273; SV 1; circular; genomic DNA; STD; PRO; 4631469 BP.
+XX
+AC   CP009273;
+XX
+PR   Project:PRJNA257976;
+XX
+DT   10-SEP-2014 (Rel. 122, Created)
+XX
+DE   Escherichia coli BW25113, complete genome.
+XX
+KW   .
+XX
+OS   Escherichia coli BW25113
+OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
+OC   Enterobacteriaceae; Escherichia.
+XX
+RN   [1]
+RP   1-4631469
+RA   Grenier F., Matteau D., Baby V., Rodrigue S.;
+RT   "Complete genome sequence of Escherichia coli BW25113";
+RL   Unpublished.
+XX
+CC   ##Genome-Assembly-Data-START##
+CC   Assembly Method           :: Newbler v. 2.6
+CC   Reference-guided Assembly :: U00096.3
+CC   Genome Coverage           :: 100x
+CC   Sequencing Technology     :: Illumina HiSeq; Sanger
+CC   ##Genome-Assembly-Data-END##
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..300
+FT                   /organism="Escherichia coli BW25113"
+FT                   /strain="K-12"
+FT                   /sub_strain="BW25113"
+FT                   /mol_type="genomic DNA"
+FT                   /country="USA:Indiana"
+FT                   /collection_date="2000"
+FT                   /note="from B. L. Wanner laboratory; genotype: rrnB3
+FT                   lacZ4787 hsdR514 (araBAD)567 (rhaBAD)568 rph-1"
+FT                   /db_xref="taxon:679895"
+FT                   /culture_collection="CGSC:7636"
+FT   gene            190..255
+FT                   /gene="thrL"
+FT                   /gene_synonym="ECK0001"
+FT                   /gene_synonym="JW4367"
+FT                   /locus_tag="BW25113_0001"
+FT   CDS             190..255
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /gene="thrL"
+FT                   /gene_synonym="ECK0001"
+FT                   /gene_synonym="JW4367"
+FT                   /locus_tag="BW25113_0001"
+FT                   /product="thr operon leader peptide"
+FT                   /function="leader; Amino acid biosynthesis: Threonine"
+FT                   /db_xref="EnsemblGenomes-Gn:BW25113_0001"
+FT                   /db_xref="EnsemblGenomes-Tr:AIN30539"
+FT                   /protein_id="AIN30539.1"
+FT                   /translation="MKRISTTITTTITITTGNGAG"
+XX
+SQ   Sequence 4631469 BP; 1140509 A; 1177154 C; 1174646 G; 1139160 T; 0 other;
+     agcttttcat tctgactgca acgggcaata tgtctctgtg tggattaaaa aaagagtgtc        60
+     tgatagcagc ttctgaactg gttacctgcc gtgagtaaat taaaatttta ttgacttagg       120
+     tcactaaata ctttaaccaa tataggcata gcgcacagac agataaaaat tacagagtac       180
+     acaacatcca tgaaacgcat tagcaccacc attaccacca ccatcaccat taccacaggt       240
+     aacggtgcgg gctgacgcgt acaggaaaca cagaaaaaag cccgcacctg acagtgcggg       300
+//