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view test-data/output.gtf @ 1:3198f52bffaa draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/brew3r_r commit fa525468780f3dea175da15852b1b8c17e1a80d3
author iuc
date Tue, 18 Jun 2024 05:36:32 +0000
parents 928a52b5c938
children
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##gff-version 2
##source-version rtracklayer 1.64.0
##date 2024-06-06
chr1	rtracklayer	exon	5	19	.	+	.	gene_id "gene11"; gene_name "gene11"; transcript_id "transcript11"; exon_id "exon11.ext"; exon_number 1
chr1	rtracklayer	exon	20	30	.	+	.	gene_id "gene12"; gene_name "gene12"; transcript_id "transcript12"; exon_id "exon12"; exon_number 1
chr1	rtracklayer	exon	105	119	.	+	.	gene_id "gene21"; gene_name "gene21"; transcript_id "transcript21"; exon_id "exon21.ext"; exon_number 1
chr1	rtracklayer	exon	120	125	.	+	.	gene_id "gene22"; gene_name "gene22"; transcript_id "transcript22"; exon_id "exon22"; exon_number 1
chr1	rtracklayer	exon	205	219	.	+	.	gene_id "gene31"; gene_name "gene31"; transcript_id "transcript31"; exon_id "exon31.ext"; exon_number 1
chr1	rtracklayer	exon	220	225	.	+	.	gene_id "gene32"; gene_name "gene32"; transcript_id "transcript32"; exon_id "exon32.ext"; exon_number 1
chr1	rtracklayer	exon	305	310	.	+	.	gene_id "gene41"; gene_name "gene41"; transcript_id "transcript41"; exon_id "exon41"; exon_number 1
chr1	rtracklayer	exon	305	325	.	+	.	gene_id "gene42"; gene_name "gene42"; transcript_id "transcript42"; exon_id "exon42.ext"; exon_number 1
chr1	rtracklayer	exon	405	410	.	+	.	gene_id "gene51"; gene_name "gene51"; transcript_id "transcript51"; exon_id "exon51"; exon_number 1
chr1	rtracklayer	exon	405	425	.	+	.	gene_id "gene52"; gene_name "gene52"; transcript_id "transcript52"; exon_id "exon52"; exon_number 1
chr1	rtracklayer	exon	505	519	.	+	.	gene_id "gene61"; gene_name "gene61"; transcript_id "transcript61"; exon_id "exon61.ext"; exon_number 1
chr1	rtracklayer	exon	520	525	.	+	.	gene_id "gene62"; gene_name "gene62"; transcript_id "transcript62"; exon_id "exon62.ext"; exon_number 1
chr1	rtracklayer	exon	533	540	.	+	.	gene_id "gene62"; gene_name "gene62"; transcript_id "transcript62"; exon_id "BREW3R0000000003"; exon_number 2
chr1	rtracklayer	exon	545	560	.	+	.	gene_id "gene62"; gene_name "gene62"; transcript_id "transcript62"; exon_id "BREW3R0000000004"; exon_number 3
chr1	rtracklayer	exon	572	575	.	+	.	gene_id "gene62"; gene_name "gene62"; transcript_id "transcript62"; exon_id "BREW3R0000000005"; exon_number 4
chr1	rtracklayer	exon	601	610	.	+	.	gene_id "gene71"; gene_name "gene71"; transcript_id "transcript72"; exon_id "exon71"; exon_number 1
chr1	rtracklayer	exon	601	625	.	+	.	gene_id "gene71"; gene_name "gene71"; transcript_id "transcript71"; exon_id "exon71.ext"; exon_number 1
chr1	rtracklayer	exon	630	640	.	+	.	gene_id "gene71"; gene_name "gene71"; transcript_id "transcript72"; exon_id "exon72"; exon_number 2
chr1	rtracklayer	exon	701	710	.	+	.	gene_id "gene82"; gene_name "gene82"; transcript_id "transcript82"; exon_id "exon82"; exon_number 1
chr1	rtracklayer	exon	701	725	.	+	.	gene_id "gene81"; gene_name "gene81"; transcript_id "transcript81"; exon_id "exon81.ext"; exon_number 1
chr1	rtracklayer	exon	730	740	.	+	.	gene_id "gene82"; gene_name "gene82"; transcript_id "transcript82"; exon_id "exon83"; exon_number 2
chr1	rtracklayer	exon	801	810	.	+	.	gene_id "gene1"; gene_name "gene1"; transcript_id "transcript92"; exon_id "exon92"; exon_number 1
chr1	rtracklayer	exon	801	825	.	+	.	gene_id "gene1"; gene_name "gene1"; transcript_id "transcript91"; exon_id "exon91.ext"; exon_number 1
chr1	rtracklayer	exon	830	840	.	+	.	gene_id "gene1"; gene_name "gene1"; transcript_id "transcript92"; exon_id "exon93"; exon_number 2
chr1	rtracklayer	exon	901	908	.	+	.	gene_id "gene101"; gene_name "gene101"; transcript_id "transcript101"; exon_id "exon101"; exon_number 1
chr1	rtracklayer	exon	901	910	.	+	.	gene_id "gene102"; gene_name "gene102"; transcript_id "transcript102"; exon_id "exon102"; exon_number 1
chr1	rtracklayer	exon	930	940	.	+	.	gene_id "gene102"; gene_name "gene102"; transcript_id "transcript102"; exon_id "exon103"; exon_number 2
chr1	rtracklayer	exon	1005	1025	.	+	.	gene_id "gene111"; gene_name "Gm001"; transcript_id "transcript111"; exon_id "exon111.ext"; exon_number 1
chr1	rtracklayer	exon	1033	1040	.	+	.	gene_id "gene111"; gene_name "Gm001"; transcript_id "transcript111"; exon_id "BREW3R0000000001"; exon_number 2
chr1	rtracklayer	exon	1045	1054	.	+	.	gene_id "gene111"; gene_name "Gm001"; transcript_id "transcript111"; exon_id "BREW3R0000000002"; exon_number 3
chr1	rtracklayer	exon	1055	1070	.	+	.	gene_id "gene112"; gene_name "gene112"; transcript_id "transcript112"; exon_id "exon112"; exon_number 1
chr1	rtracklayer	exon	1100	1113	.	+	.	gene_id "gene121"; gene_name "gene121"; transcript_id "transcript121"; exon_id "exon121.ext"; exon_number 1
chr1	rtracklayer	exon	1103	1120	.	-	.	gene_id "gene122"; gene_name "gene122"; transcript_id "transcript122"; exon_id "exon122.ext"; exon_number 1