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annotate test-data/transcriptome_results/short_summary @ 5:1440ae06552f draft

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planemo upload commit 85b6db2b28551a663821655c13134b47290140d2
author iuc
date Mon, 13 May 2019 09:17:19 -0400
parents 382a4c19007f
children 4048d82f0c88
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382a4c19007f planemo upload commit 2896dcfd180800d00ea413a59264ef8b11788b8e
iuc
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1 # BUSCO version is: 3.0.2
382a4c19007f planemo upload commit 2896dcfd180800d00ea413a59264ef8b11788b8e
iuc
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2 # The lineage dataset is: N/A (Creation date: N/A, number of species: N/A, number of BUSCOs: N/A)
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5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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3 # To reproduce this run: python /tmp/tmpCgx5rU/job_working_directory/000/6/conda-env/bin/BUSCO.py -i /tmp/tmpCgx5rU/files/000/dataset_9.dat -o busco_galaxy -l /home/abretaud/iuc_tools_abretaud/tools/busco/test-data/arthropoda/ -m tran -c 1 -sp generic -e 0.01 -z
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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4 #
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5 # Summarized benchmarking in BUSCO notation for file /tmp/tmpCgx5rU/files/000/dataset_9.dat
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382a4c19007f planemo upload commit 2896dcfd180800d00ea413a59264ef8b11788b8e
iuc
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6 # BUSCO was run in mode: transcriptome
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5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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8 C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:1
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9
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10 0 Complete BUSCOs (C)
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11 0 Complete and single-copy BUSCOs (S)
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12 0 Complete and duplicated BUSCOs (D)
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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13 0 Fragmented BUSCOs (F)
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14 1 Missing BUSCOs (M)
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15 1 Total BUSCO groups searched