annotate test-data/genome_results_metaeuk_auto/short_summary @ 13:46ae58b1d792 draft

"planemo upload commit 2adcb199f279b9ea1c3896a1f7a5b8cd9311228b"
author iuc
date Fri, 05 Nov 2021 08:41:35 +0000
parents 1278204240d8
children e4bd1e99bacf
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
12
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
1 # BUSCO version is: 5.2.2
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
2 # The lineage dataset is: eukaryota_odb10 (Creation date: 2020-09-10, number of genomes: 70, number of BUSCOs: 255)
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmp5e3tdhzs/files/c/9/b/dataset_c9b61090-5a2d-4dd0-8fd1-d147a4e1573c.dat
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
4 # BUSCO was run in mode: genome
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
5 # Gene predictor used: metaeuk
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
6
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
7 ***** Results: *****
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
8
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
9 C:0.4%[S:0.4%,D:0.0%],F:0.0%,M:99.6%,n:255
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
10 1 Complete BUSCOs (C)
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
11 1 Complete and single-copy BUSCOs (S)
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
12 0 Complete and duplicated BUSCOs (D)
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
13 0 Fragmented BUSCOs (F)
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
14 254 Missing BUSCOs (M)
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
15 255 Total BUSCO groups searched
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
16
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
17 Dependencies and versions:
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
18 hmmsearch: 3.1
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
19 prodigal: 2.6.3
1278204240d8 "planemo upload commit d00431b92294849bd41d369d8a699e4669e5fc19"
iuc
parents:
diff changeset
20 metaeuk: 5.34c21f2