Mercurial > repos > iuc > busco

annotate test-data/proteome_results/short_summary @ 22:e5c372c91e46 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 8565e8283f976870104e08aa7729a1624edd6f58
author iuc
date Tue, 29 Oct 2024 14:13:47 +0000
parents 2babe6d5c561
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
21
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
1 # BUSCO version is: 5.7.1
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2024-01-08, number of genomes: 90, number of BUSCOs: 1013)
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmpl5l1blpe/files/e/0/f/dataset_e0f4947a-b95c-45dc-bee8-301d13fe1fe5.dat
0
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
parents:
diff changeset
4 # BUSCO was run in mode: proteins
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
parents:
diff changeset
5
21
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
6 ***** Results: *****
0
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
parents:
diff changeset
7
21
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
8 C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
9 1 Complete BUSCOs (C)
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
10 1 Complete and single-copy BUSCOs (S)
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
11 0 Complete and duplicated BUSCOs (D)
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
12 0 Fragmented BUSCOs (F)
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
13 1012 Missing BUSCOs (M)
7
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
14 1013 Total BUSCO groups searched
10
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
15
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
16 Dependencies and versions:
21
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
17 hmmsearch: 3.1
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
18 python: sys.version_info(major=3, minor=9, micro=19, releaselevel='final', serial=0)
2babe6d5c561 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 20
diff changeset
19 busco: 5.7.1