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comparison test-data/genome_results/short_summary @ 10:2dd755c1c6ff draft

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"planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
author iuc
date Thu, 15 Jul 2021 13:09:00 +0000
parents cf13a1e03e5b
children bb935709506a
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9:cf13a1e03e5b 10:2dd755c1c6ff
1 # BUSCO version is: 5.0.0 1 # BUSCO version is: 5.2.1
2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of species: 90, number of BUSCOs: 1013) 2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmp7tgu744e/files/3/3/6/dataset_336adf79-955a-4ca8-aeda-96fc1fce9a4c.dat 3 # Summarized benchmarking in BUSCO notation for file /tmp/tmpctznxi43/files/9/e/c/dataset_9ec37448-e146-4536-b66f-9082e1734ea4.dat
4 # BUSCO was run in mode: genome 4 # BUSCO was run in mode: genome
5 # Gene predictor used: augustus 5 # Gene predictor used: augustus
6 6
7 ***** Results: ***** 7 ***** Results: *****
8 8
11 1 Complete and single-copy BUSCOs (S) 11 1 Complete and single-copy BUSCOs (S)
12 0 Complete and duplicated BUSCOs (D) 12 0 Complete and duplicated BUSCOs (D)
13 0 Fragmented BUSCOs (F) 13 0 Fragmented BUSCOs (F)
14 1012 Missing BUSCOs (M) 14 1012 Missing BUSCOs (M)
15 1013 Total BUSCO groups searched 15 1013 Total BUSCO groups searched
16
17 Dependencies and versions:
18 hmmsearch: 3.1
19 makeblastdb: 2.12.0+
20 tblastn: 2.12.0+
21 augustus: 3.4.0
22 gff2gbSmallDNA.pl: None
23 new_species.pl: None
24 etraining: None