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comparison test-data/test-db/busco_downloads/information/lineages_list.2021-12-14.txt @ 18:94170eee0ad8 draft
planemo upload commit 09dff03131fb917a00cc291580ed7c4f38b266c9
author | iuc |
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date | Fri, 14 Apr 2023 08:13:46 +0000 |
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17:e824f5d958d0 | 18:94170eee0ad8 |
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1 | |
2 ################################################ | |
3 | |
4 Datasets available to be used with BUSCO v4 and v5: | |
5 | |
6 bacteria_odb10 | |
7 - acidobacteria_odb10 | |
8 - actinobacteria_phylum_odb10 | |
9 - actinobacteria_class_odb10 | |
10 - corynebacteriales_odb10 | |
11 - micrococcales_odb10 | |
12 - propionibacteriales_odb10 | |
13 - streptomycetales_odb10 | |
14 - streptosporangiales_odb10 | |
15 - coriobacteriia_odb10 | |
16 - coriobacteriales_odb10 | |
17 - aquificae_odb10 | |
18 - bacteroidetes-chlorobi_group_odb10 | |
19 - bacteroidetes_odb10 | |
20 - bacteroidia_odb10 | |
21 - bacteroidales_odb10 | |
22 - cytophagia_odb10 | |
23 - cytophagales_odb10 | |
24 - flavobacteriia_odb10 | |
25 - flavobacteriales_odb10 | |
26 - sphingobacteriia_odb10 | |
27 - chlorobi_odb10 | |
28 - chlamydiae_odb10 | |
29 - chloroflexi_odb10 | |
30 - cyanobacteria_odb10 | |
31 - chroococcales_odb10 | |
32 - nostocales_odb10 | |
33 - oscillatoriales_odb10 | |
34 - synechococcales_odb10 | |
35 - firmicutes_odb10 | |
36 - bacilli_odb10 | |
37 - bacillales_odb10 | |
38 - lactobacillales_odb10 | |
39 - clostridia_odb10 | |
40 - clostridiales_odb10 | |
41 - thermoanaerobacterales_odb10 | |
42 - selenomonadales_odb10 | |
43 - tissierellia_odb10 | |
44 - tissierellales_odb10 | |
45 - fusobacteria_odb10 | |
46 - fusobacteriales_odb10 | |
47 - planctomycetes_odb10 | |
48 - proteobacteria_odb10 | |
49 - alphaproteobacteria_odb10 | |
50 - rhizobiales_odb10 | |
51 - rhizobium-agrobacterium_group_odb10 | |
52 - rhodobacterales_odb10 | |
53 - rhodospirillales_odb10 | |
54 - rickettsiales_odb10 | |
55 - sphingomonadales_odb10 | |
56 - betaproteobacteria_odb10 | |
57 - burkholderiales_odb10 | |
58 - neisseriales_odb10 | |
59 - nitrosomonadales_odb10 | |
60 - delta-epsilon-subdivisions_odb10 | |
61 - deltaproteobacteria_odb10 | |
62 - desulfobacterales_odb10 | |
63 - desulfovibrionales_odb10 | |
64 - desulfuromonadales_odb10 | |
65 - epsilonproteobacteria_odb10 | |
66 - campylobacterales_odb10 | |
67 - gammaproteobacteria_odb10 | |
68 - alteromonadales_odb10 | |
69 - cellvibrionales_odb10 | |
70 - chromatiales_odb10 | |
71 - enterobacterales_odb10 | |
72 - legionellales_odb10 | |
73 - oceanospirillales_odb10 | |
74 - pasteurellales_odb10 | |
75 - pseudomonadales_odb10 | |
76 - thiotrichales_odb10 | |
77 - vibrionales_odb10 | |
78 - xanthomonadales_odb10 | |
79 - spirochaetes_odb10 | |
80 - spirochaetia_odb10 | |
81 - spirochaetales_odb10 | |
82 - synergistetes_odb10 | |
83 - tenericutes_odb10 | |
84 - mollicutes_odb10 | |
85 - entomoplasmatales_odb10 | |
86 - mycoplasmatales_odb10 | |
87 - thermotogae_odb10 | |
88 - verrucomicrobia_odb10 | |
89 archaea_odb10 | |
90 - thaumarchaeota_odb10 | |
91 - thermoprotei_odb10 | |
92 - thermoproteales_odb10 | |
93 - sulfolobales_odb10 | |
94 - desulfurococcales_odb10 | |
95 - euryarchaeota_odb10 | |
96 - thermoplasmata_odb10 | |
97 - methanococcales_odb10 | |
98 - methanobacteria_odb10 | |
99 - methanomicrobia_odb10 | |
100 - methanomicrobiales_odb10 | |
101 - halobacteria_odb10 | |
102 - halobacteriales_odb10 | |
103 - natrialbales_odb10 | |
104 - haloferacales_odb10 | |
105 eukaryota_odb10 | |
106 - alveolata_odb10 | |
107 - apicomplexa_odb10 | |
108 - aconoidasida_odb10 | |
109 - plasmodium_odb10 | |
110 - coccidia_odb10 | |
111 - euglenozoa_odb10 | |
112 - fungi_odb10 | |
113 - ascomycota_odb10 | |
114 - dothideomycetes_odb10 | |
115 - capnodiales_odb10 | |
116 - pleosporales_odb10 | |
117 - eurotiomycetes_odb10 | |
118 - chaetothyriales_odb10 | |
119 - eurotiales_odb10 | |
120 - onygenales_odb10 | |
121 - leotiomycetes_odb10 | |
122 - helotiales_odb10 | |
123 - saccharomycetes_odb10 | |
124 - sordariomycetes_odb10 | |
125 - glomerellales_odb10 | |
126 - hypocreales_odb10 | |
127 - basidiomycota_odb10 | |
128 - agaricomycetes_odb10 | |
129 - agaricales_odb10 | |
130 - boletales_odb10 | |
131 - polyporales_odb10 | |
132 - tremellomycetes_odb10 | |
133 - microsporidia_odb10 | |
134 - mucoromycota_odb10 | |
135 - mucorales_odb10 | |
136 - metazoa_odb10 | |
137 - arthropoda_odb10 | |
138 - arachnida_odb10 | |
139 - insecta_odb10 | |
140 - endopterygota_odb10 | |
141 - diptera_odb10 | |
142 - hymenoptera_odb10 | |
143 - lepidoptera_odb10 | |
144 - hemiptera_odb10 | |
145 - mollusca_odb10 | |
146 - nematoda_odb10 | |
147 - vertebrata_odb10 | |
148 - actinopterygii_odb10 | |
149 - cyprinodontiformes_odb10 | |
150 - tetrapoda_odb10 | |
151 - mammalia_odb10 | |
152 - eutheria_odb10 | |
153 - euarchontoglires_odb10 | |
154 - glires_odb10 | |
155 - primates_odb10 | |
156 - laurasiatheria_odb10 | |
157 - carnivora_odb10 | |
158 - cetartiodactyla_odb10 | |
159 - sauropsida_odb10 | |
160 - aves_odb10 | |
161 - passeriformes_odb10 | |
162 - stramenopiles_odb10 | |
163 - viridiplantae_odb10 | |
164 - chlorophyta_odb10 | |
165 - embryophyta_odb10 | |
166 - liliopsida_odb10 | |
167 - poales_odb10 | |
168 - eudicots_odb10 | |
169 - brassicales_odb10 | |
170 - fabales_odb10 | |
171 - solanales_odb10 | |
172 viruses (no root dataset) | |
173 - alphaherpesvirinae_odb10 | |
174 - baculoviridae_odb10 | |
175 - rudiviridae_odb10 | |
176 - betaherpesvirinae_odb10 | |
177 - herpesviridae_odb10 | |
178 - poxviridae_odb10 | |
179 - tevenvirinae_odb10 | |
180 - aviadenovirus_odb10 | |
181 - enquatrovirus_odb10 | |
182 - teseptimavirus_odb10 | |
183 - bclasvirinae_odb10 | |
184 - fromanvirus_odb10 | |
185 - skunavirus_odb10 | |
186 - betabaculovirus_odb10 | |
187 - pahexavirus_odb10 | |
188 - alphabaculovirus_odb10 | |
189 - tunavirinae_odb10 | |
190 - simplexvirus_odb10 | |
191 - gammaherpesvirinae_odb10 | |
192 - varicellovirus_odb10 | |
193 - cheoctovirus_odb10 | |
194 - guernseyvirinae_odb10 | |
195 - tequatrovirus_odb10 | |
196 - chordopoxvirinae_odb10 | |
197 - peduovirus_odb10 | |
198 - iridoviridae_odb10 | |
199 - spounavirinae_odb10 |