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comparison test-data/genome_results_metaeuk/short_summary @ 16:bb935709506a draft

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planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
author iuc
date Thu, 12 Jan 2023 13:28:58 +0000
parents 2dd755c1c6ff
children 2a5b8b9936bf
comparison
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15:41030a6c03b7 16:bb935709506a
1 # BUSCO version is: 5.2.1 1 # BUSCO version is: 5.4.4
2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013) 2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmpctznxi43/files/9/6/4/dataset_96441510-fb85-41dd-a4ce-8a20d74173a9.dat 3 # Summarized benchmarking in BUSCO notation for file /tmp/tmprqvmp912/files/000/dataset_28.dat
4 # BUSCO was run in mode: genome 4 # BUSCO was run in mode: euk_genome_met
5 # Gene predictor used: metaeuk 5 # Gene predictor used: metaeuk
6 6
7 ***** Results: ***** 7 ***** Results: *****
8 8
9 C:0.2%[S:0.2%,D:0.0%],F:0.0%,M:99.8%,n:1013 9 C:0.2%[S:0.2%,D:0.0%],F:0.0%,M:99.8%,n:1013
12 0 Complete and duplicated BUSCOs (D) 12 0 Complete and duplicated BUSCOs (D)
13 0 Fragmented BUSCOs (F) 13 0 Fragmented BUSCOs (F)
14 1011 Missing BUSCOs (M) 14 1011 Missing BUSCOs (M)
15 1013 Total BUSCO groups searched 15 1013 Total BUSCO groups searched
16 16
17 Assembly Statistics:
18 1 Number of scaffolds
19 1 Number of contigs
20 62370 Total length
21 0.000% Percent gaps
22 62 KB Scaffold N50
23 62 KB Contigs N50
24
25
17 Dependencies and versions: 26 Dependencies and versions:
18 hmmsearch: 3.1 27 hmmsearch: 3.1
19 metaeuk: 4.a0f584d 28 bbtools: 39.01
29 metaeuk: 6.a5d39d9
30 busco: 5.4.4