Mercurial > repos > iuc > busco

comparison test-data/transcriptome_results/short_summary @ 20:ea8146ee148f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
author iuc
date Mon, 18 Mar 2024 16:01:49 +0000
parents 2a5b8b9936bf
children 2babe6d5c561
comparison
equal deleted inserted replaced
19:2a5b8b9936bf 20:ea8146ee148f
1 # BUSCO version is: 5.5.0 1 # BUSCO version is: 5\.5\.0
2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013) 2 # The lineage dataset is: arthropoda_odb10 \(Creation date: [0-9]{4}-[0-9]{2}-[0-9]{2}, number of genomes: 90, number of BUSCOs: 1013\)
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmp5_syjrgy/files/4/3/b/dataset_43bb7c5f-29dc-4638-a19d-abb98c145794.dat 3 # Summarized benchmarking in BUSCO notation for file [a-z0-9_\-/\.]+
4 # BUSCO was run in mode: euk_tran 4 # BUSCO was run in mode: euk_tran
5 5
6 ***** Results: ***** 6 \*\*\*\*\* Results: \*\*\*\*\*
7 7
8 C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013 8 C:0\.1%\[S:0\.1%,D:0\.0%\],F:0\.0%,M:99\.9%,n:1013
9 1 Complete BUSCOs (C) 9 1 Complete BUSCOs \(C\)
10 1 Complete and single-copy BUSCOs (S) 10 1 Complete and single-copy BUSCOs \(S\)
11 0 Complete and duplicated BUSCOs (D) 11 0 Complete and duplicated BUSCOs \(D\)
12 0 Fragmented BUSCOs (F) 12 0 Fragmented BUSCOs \(F\)
13 1012 Missing BUSCOs (M) 13 1012 Missing BUSCOs \(M\)
14 1013 Total BUSCO groups searched 14 1013 Total BUSCO groups searched
15 15
16 Dependencies and versions: 16 Dependencies and versions:
17 hmmsearch: 3.1 17 hmmsearch: [0-9\.\+]+
18 metaeuk: 6.a5d39d9 18 metaeuk: [0-9a-z\.\+]+
19 busco: 5.5.0 19 busco: [0-9\.\+]+