diff test-data/genome_results_metaeuk/short_summary @ 21:2babe6d5c561 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
author iuc
date Fri, 30 Aug 2024 15:19:56 +0000
parents ea8146ee148f
children
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--- a/test-data/genome_results_metaeuk/short_summary	Mon Mar 18 16:01:49 2024 +0000
+++ b/test-data/genome_results_metaeuk/short_summary	Fri Aug 30 15:19:56 2024 +0000
@@ -1,30 +1,32 @@
-# BUSCO version is: 5\.5\.0 
-# The lineage dataset is: arthropoda_odb10 \(Creation date: [0-9]{4}-[0-9]{2}-[0-9]{2}, number of genomes: 90, number of BUSCOs: 1013\)
-# Summarized benchmarking in BUSCO notation for file [a-z0-9_\-/\.]+
-# BUSCO was run in mode: euk_genome_met
-# Gene predictor used: metaeuk
+# BUSCO version is: 5.7.1 
+# The lineage dataset is: arthropoda_odb10 (Creation date: 2024-01-08, number of genomes: 90, number of BUSCOs: 1013)
+# Summarized benchmarking in BUSCO notation for file /tmp/tmpl5l1blpe/files/f/3/1/dataset_f31d44e3-c824-4cdf-92ba-99a2c26071d2.dat
+# BUSCO was run in mode: euk_genome_min
+# Gene predictor used: miniprot
 
-	\*\*\*\*\* Results: \*\*\*\*\*
+	***** Results: *****
 
-	C:0\.2%\[S:0\.2%,D:0\.0%\],F:0\.0%,M:99\.8%,n:1013	   
-	2	Complete BUSCOs \(C\)			   
-	2	Complete and single-copy BUSCOs \(S\)	   
-	0	Complete and duplicated BUSCOs \(D\)	   
-	0	Fragmented BUSCOs \(F\)			   
-	1011	Missing BUSCOs \(M\)			   
+	C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013	   
+	1	Complete BUSCOs (C)			   
+	1	Complete and single-copy BUSCOs (S)	   
+	0	Complete and duplicated BUSCOs (D)	   
+	0	Fragmented BUSCOs (F)			   
+	1012	Missing BUSCOs (M)			   
 	1013	Total BUSCO groups searched		   
 
 Assembly Statistics:
 	1	Number of scaffolds
 	1	Number of contigs
 	62370	Total length
-	0\.000%	Percent gaps
+	0.000%	Percent gaps
 	62 KB	Scaffold N50
 	62 KB	Contigs N50
 
 
 Dependencies and versions:
-	hmmsearch: [0-9\.\+]+
-	bbtools: [0-9\.\+]+
-	metaeuk: [0-9a-z\.\+]+
-	busco: [0-9\.\+]+
+	hmmsearch: 3.1
+	bbtools: 39.06
+	miniprot_index: 0.13-r248
+	miniprot_align: 0.13-r248
+	python: sys.version_info(major=3, minor=9, micro=19, releaselevel='final', serial=0)
+	busco: 5.7.1