diff test-data/genome_results/short_summary @ 16:bb935709506a draft

planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
author iuc
date Thu, 12 Jan 2023 13:28:58 +0000
parents 2dd755c1c6ff
children 2a5b8b9936bf
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line diff
--- a/test-data/genome_results/short_summary	Mon Apr 11 09:02:11 2022 +0000
+++ b/test-data/genome_results/short_summary	Thu Jan 12 13:28:58 2023 +0000
@@ -1,7 +1,7 @@
-# BUSCO version is: 5.2.1 
+# BUSCO version is: 5.4.4 
 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
-# Summarized benchmarking in BUSCO notation for file /tmp/tmpctznxi43/files/9/e/c/dataset_9ec37448-e146-4536-b66f-9082e1734ea4.dat
-# BUSCO was run in mode: genome
+# Summarized benchmarking in BUSCO notation for file /tmp/tmprqvmp912/files/000/dataset_22.dat
+# BUSCO was run in mode: euk_genome_aug
 # Gene predictor used: augustus
 
 	***** Results: *****
@@ -14,11 +14,22 @@
 	1012	Missing BUSCOs (M)			   
 	1013	Total BUSCO groups searched		   
 
+Assembly Statistics:
+	1	Number of scaffolds
+	1	Number of contigs
+	62370	Total length
+	0.000%	Percent gaps
+	62 KB	Scaffold N50
+	62 KB	Contigs N50
+
+
 Dependencies and versions:
 	hmmsearch: 3.1
-	makeblastdb: 2.12.0+
-	tblastn: 2.12.0+
-	augustus: 3.4.0
+	bbtools: 39.01
+	makeblastdb: 2.13.0+
+	tblastn: 2.13.0+
+	augustus: 3.5.0
 	gff2gbSmallDNA.pl: None
 	new_species.pl: None
 	etraining: None
+	busco: 5.4.4