# HG changeset patch
# User iuc
# Date 1510250836 18000
# Node ID 95219305823aac326239d6a8693f698eed1f9356
# Parent  a6ea26c1f225f146cc418e15df0e06d10e477cf8
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bwameth commit 11ee7ac206d41894c0b6a11f2439aaea490824f0

diff -r a6ea26c1f225 -r 95219305823a bwameth.xml
--- a/bwameth.xml	Tue Apr 11 09:19:24 2017 -0400
+++ b/bwameth.xml	Thu Nov 09 13:07:16 2017 -0500
@@ -1,8 +1,8 @@
-<tool id="bwameth" name="bwameth" version="0.2.0.3" profile="17.01">
+<tool id="bwameth" name="bwameth" version="0.2.0.4" profile="17.01">
     <description>Fast and accurate aligner of BS-Seq reads.</description>
     <requirements>
-        <requirement type="package" version="1.2">samtools</requirement>
         <requirement type="package" version="0.2.0">bwameth</requirement>
+        <requirement type="package" version="0.7.16">bwa</requirement>
     </requirements>
     <version_command>bwameth.py --version</version_command>
     <command detect_errors="aggressive">
diff -r a6ea26c1f225 -r 95219305823a test-data/output.bam
Binary file test-data/output.bam has changed
diff -r a6ea26c1f225 -r 95219305823a tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Apr 11 09:19:24 2017 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,9 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-    <package name="samtools" version="1.2">
-       <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
-    <package name="bwameth" version="0.2.0">
-       <repository changeset_revision="54d14a994f71" name="package_python_2_7_bwameth_0_2_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
-</tool_dependency>