Mercurial > repos > iuc > cat_bins

changeset 3:0e63d03c8790 draft default tip

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 47be73f0ca2b3a3bcb79a1fa7cf15a63c7facd19
author iuc
date Fri, 16 Feb 2024 10:45:27 +0000
parents 31853794ace2
children
files cat_bins.xml macros.xml
diffstat 2 files changed, 10 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/cat_bins.xml	Thu Mar 09 21:01:12 2023 +0000
+++ b/cat_bins.xml	Fri Feb 16 10:45:27 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <expand macro="version_command" />
     <command detect_errors="exit_code"><![CDATA[
@@ -51,7 +52,7 @@
         <expand macro="outputs" />
     </outputs>
     <tests>
-        <test>
+        <test expect_num_outputs="1">
             <param name="mags" ftype="fasta" value="genome2.fna"/>
             <expand macro="test_catdb"/>
             <param name="select_outputs" value="bin2classification"/>
@@ -61,7 +62,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test>
+        <test expect_num_outputs="1">
             <param name="mags" ftype="fasta" value="genome3.fna"/>
             <expand macro="test_catdb"/>
             <param name="select_outputs" value="bin2classification"/>
@@ -71,7 +72,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test>
+        <test expect_num_outputs="1">
             <param name="mags" ftype="fasta" value="genome2.fna,genome3.fna"/>
             <expand macro="test_catdb"/>
             <param name="select_outputs" value="bin2classification"/>
@@ -82,7 +83,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test>
+        <test expect_num_outputs="4">
             <param name="mags" ftype="fasta" value="genome2.fna,genome3.fna"/>
             <expand macro="test_catdb"/>
             <param name="select_outputs" value="bin2classification"/>
--- a/macros.xml	Thu Mar 09 21:01:12 2023 +0000
+++ b/macros.xml	Fri Feb 16 10:45:27 2024 +0000
@@ -1,6 +1,11 @@
 <macros>
     <token name="@TOOL_VERSION@">5.2.3</token>
     <token name="@VERSION_SUFFIX@">0</token>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">cat_bins</xref>
+        </xrefs>
+    </xml>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">cat</requirement>