Mercurial > repos > iuc > cat_contigs

comparison cat_contigs.xml @ 1:c6c77d840993 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit b6c674376eade4fdf9ffb31380f6689ede84a091"
author iuc
date Wed, 08 Jan 2020 13:03:33 -0500
parents 11a61934bfb3
children 7aebc0137f20
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0:11a61934bfb3 1:c6c77d840993
1 <tool id="cat_contigs" name="CAT contigs" version="@VERSION@.0"> 1 <tool id="cat_contigs" name="CAT contigs" version="@VERSION@.1">
2 <description>annotate with taxonomic classification</description> 2 <description>annotate with taxonomic classification</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
18 ]]></command> 18 ]]></command>
19 <inputs> 19 <inputs>
20 <param name="contigs_fasta" type="data" format="fasta" label="Contigs fasta"/> 20 <param name="contigs_fasta" type="data" format="fasta" label="Contigs fasta"/>
21 <expand macro="cat_db" /> 21 <expand macro="cat_db" />
22 <expand macro="use_intermediates" /> 22 <expand macro="use_intermediates" />
23 <expand macro="custom_settings" /> 23 <expand macro="custom_settings_contigs" />
24 <expand macro="diamond_options" /> 24 <expand macro="diamond_options" />
25 <expand macro="add_names" /> 25 <expand macro="add_names" />
26 <expand macro="summarise" /> 26 <expand macro="summarise" />
27 <expand macro="select_cat_outputs" /> 27 <expand macro="select_cat_outputs" />
28 </inputs> 28 </inputs>