diff cemitool.xml @ 1:81bffdf16b71 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cemitool commit 90f5b1b6df8661779e097330e1f11346c6f388fc
author iuc
date Mon, 19 Aug 2024 10:47:14 +0000
parents 3f9ff31c88bb
children
line wrap: on
line diff
--- a/cemitool.xml	Mon Oct 10 16:55:19 2022 +0000
+++ b/cemitool.xml	Mon Aug 19 10:47:14 2024 +0000
@@ -17,6 +17,9 @@
         #if $interactions
             -I '$interactions'
         #end if
+        #if str($beta):
+            -B $beta
+        #end if
         -f $advanced_parameters.filter
         -i $advanced_parameters.filter_pval
         -a $advanced_parameters.apply_vst
@@ -51,6 +54,8 @@
         <param name="interactions" type="data" format="tabular" optional="true" label="Interactions data" help="Interaction data, 
             such as protein-protein interactions can be added in order to generate annotated module graphs. 
             Interaction files contains two columns for interacting pairs of genes"/>
+        <param name="beta" type="integer" min="0" label="Beta value" optional="true"
+            help="The beta value is a parameter that lies in the core of the weighted gene co-expression network analysis (WGCNA)."/>
         <param name="outputs" type="select" multiple="true" display="checkboxes" label="Outputs selector">
             <option value="report" selected="true">Report</option>
             <option value="tables">Tables</option>