Mercurial > repos > iuc > checkm2_build_database

annotate data_manager_conf.xml @ 2:df2f47a0e57a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit 2ae2ddbe15eb071a70355aa0738d753e8d2cdc2e
author iuc
date Wed, 19 Feb 2025 13:53:53 +0000
parents 64630d815957
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4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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1 <data_managers>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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2 <data_manager tool_file="data_manager/checkm2_datamanager.xml" id="checkm2_build_database">
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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3 <data_table name="checkm2">
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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4 <output>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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5 <column name="value"/>
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64630d815957 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit 043f6bb449b27287b413a937b21d918569cfdad7
iuc
parents: 0
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6 <column name="dbkey"/>
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4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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7 <column name="name"/>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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8 <column name="version"/>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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9 <column name="path" output_ref="out_file">
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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10 <move type="file">
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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11 <source>${path}</source>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">checkm2/${value}/${path}</target>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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13 </move>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/checkm2/${value}/${path}</value_translation>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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15 <value_translation type="function">abspath</value_translation>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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16 </column>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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17 </output>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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18 </data_table>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
parents:
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19 </data_manager>
4abc306ec842 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
iuc
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20 </data_managers>