Mercurial > repos > iuc > checkm2_build_database
diff tool-data/checkm2.loc.sample @ 0:4abc306ec842 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit f02ef28c39a18da4afb9148d0342244f6788485a
| author | iuc |
|---|---|
| date | Tue, 14 Jan 2025 20:27:00 +0000 |
| parents | |
| children | 64630d815957 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/checkm2.loc.sample Tue Jan 14 20:27:00 2025 +0000 @@ -0,0 +1,18 @@ +#This is a sample file distributed with Galaxy that enables tools +#to use a the checkm2 dabase. +#You will need to create these data files using the following command + +#checkm2 database --download --path /custom/path/ + +#and then create a checkm2_db_versioned.loc file similar to this one (store it in this +#directory) that points to the directories in which those files are stored. + +#The checkm2_db_versioned.loc file has this format (longer white space +#characters are TAB characters): +# +#<unique_build_id> <display_name> <version> <file_base_path> + +#The <version> column indicates the checkm2 version that generated the database + +# +#diamond_db_1.0.2 Diamond database 1.0.2 /mnt/galaxyIndices/Checkm2_database/uniref100.KO.1.dmnd