Mercurial > repos > iuc > checkm_analyze
changeset 1:5ee29434330f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit a96defec82bfa9628fa821ffa6df5c68314a41d8
| author | iuc |
|---|---|
| date | Mon, 08 Aug 2022 20:00:57 +0000 |
| parents | 7ccea589e8b7 |
| children | bcb8dc01f296 |
| files | analyze.xml macros.xml |
| diffstat | 2 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/analyze.xml Fri Jul 29 20:31:27 2022 +0000 +++ b/analyze.xml Mon Aug 08 20:00:57 2022 +0000 @@ -36,7 +36,7 @@ <data name="bin_stats_analyze" format="tabular" from_work_dir="output/storage/bin_stats.analyze.tsv" label="${tool.name} on ${on_string}: Marker gene bin stats" /> <data name="checkm_hmm_info" format="zip" from_work_dir="output/storage/checkm_hmm_info.pkl.gz" label="${tool.name} on ${on_string}: Marker gene HMM info for each bin" /> <collection name="hmmer_analyze_ali" type="list" label="${tool.name} on ${on_string}: HMMER alignment file for each bin"> - <filter>ali and 'hmmer_analyze_ali' in extra_outputs</filter> + <filter>ali and extra_outputs and 'hmmer_analyze_ali' in extra_outputs</filter> <discover_datasets pattern="(?P<designation>.*)/hmmer\.analyze\.ali\.txt" format="txt" directory="output/bins/" recurse="true" match_relative_path="true"/> </collection> </outputs>
--- a/macros.xml Fri Jul 29 20:31:27 2022 +0000 +++ b/macros.xml Mon Aug 08 20:00:57 2022 +0000 @@ -119,7 +119,7 @@ <filter>'alignment_file' in extra_outputs</filter> </data>--> <data name="marker_gene_stats" format="tabular" from_work_dir="output/storage/marker_gene_stats.tsv" label="${tool.name} on ${on_string}: Marker gene statistics"> - <filter>'marker_gene_stats' in extra_outputs</filter> + <filter>extra_outputs and 'marker_gene_stats' in extra_outputs</filter> </data> </xml> <xml name="rank_taxon">