diff tool-data/class.loc.sample @ 5:d030ce59f075 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit ea21e425f6a04a586626c4a6d848aed1d1261b30
author iuc
date Sat, 16 Aug 2025 10:22:33 +0000
parents 626ab1058170
children
line wrap: on
line diff
--- a/tool-data/class.loc.sample	Tue Jun 17 12:58:00 2025 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,57 +0,0 @@
-# File generated by format_taxon_list.py script
-# taxon	description
-Acidobacteriia	Acidobacteriia (10 genomes, 572 marker genes, 395 marker sets)
-Aciduliprofundum	Aciduliprofundum (2 genomes, 763 marker genes, 130 marker sets)
-Actinobacteria	Actinobacteria (729 genomes, 205 marker genes, 119 marker sets)
-Alphaproteobacteria	Alphaproteobacteria (648 genomes, 225 marker genes, 148 marker sets)
-Aquificae	Aquificae (18 genomes, 486 marker genes, 369 marker sets)
-Archaeoglobi	Archaeoglobi (5 genomes, 619 marker genes, 392 marker sets)
-Bacilli	Bacilli (821 genomes, 250 marker genes, 136 marker sets)
-Bacteroidetes Order II. Incertae sedis	Bacteroidetes Order II. Incertae sedis (5 genomes, 801 marker genes, 466 marker sets)
-Bacteroidia	Bacteroidia (211 genomes, 401 marker genes, 266 marker sets)
-Betaproteobacteria	Betaproteobacteria (322 genomes, 387 marker genes, 234 marker sets)
-Chlamydiia	Chlamydiia (64 genomes, 455 marker genes, 185 marker sets)
-Chlorobia	Chlorobia (12 genomes, 612 marker genes, 333 marker sets)
-Chloroflexi	Chloroflexi (9 genomes, 452 marker genes, 315 marker sets)
-Chroococcales	Chroococcales (55 genomes, 490 marker genes, 378 marker sets)
-Clostridia	Clostridia (446 genomes, 196 marker genes, 110 marker sets)
-Cytophagia	Cytophagia (48 genomes, 438 marker genes, 328 marker sets)
-Deferribacteres	Deferribacteres (6 genomes, 564 marker genes, 339 marker sets)
-Dehalococcoidetes	Dehalococcoidetes (5 genomes, 755 marker genes, 54 marker sets)
-Deinococci	Deinococci (40 genomes, 528 marker genes, 359 marker sets)
-Deltaproteobacteria	Deltaproteobacteria (93 genomes, 197 marker genes, 125 marker sets)
-Dictyoglomia	Dictyoglomia (2 genomes, 1060 marker genes, 103 marker sets)
-Epsilonproteobacteria	Epsilonproteobacteria (111 genomes, 445 marker genes, 271 marker sets)
-Erysipelotrichi	Erysipelotrichi (18 genomes, 301 marker genes, 159 marker sets)
-Flavobacteriia	Flavobacteriia (126 genomes, 321 marker genes, 202 marker sets)
-Fusobacteriia	Fusobacteriia (32 genomes, 289 marker genes, 159 marker sets)
-Gammaproteobacteria	Gammaproteobacteria (1167 genomes, 280 marker genes, 178 marker sets)
-Halobacteria	Halobacteria (59 genomes, 367 marker genes, 241 marker sets)
-Holophagae	Holophagae (2 genomes, 883 marker genes, 459 marker sets)
-Ignavibacteria	Ignavibacteria (2 genomes, 1003 marker genes, 383 marker sets)
-Methanobacteria	Methanobacteria (12 genomes, 513 marker genes, 264 marker sets)
-Methanococci	Methanococci (16 genomes, 610 marker genes, 439 marker sets)
-Methanomicrobia	Methanomicrobia (29 genomes, 248 marker genes, 165 marker sets)
-Mollicutes	Mollicutes (119 genomes, 177 marker genes, 105 marker sets)
-Negativicutes	Negativicutes (64 genomes, 334 marker genes, 167 marker sets)
-Nitrosopumilales	Nitrosopumilales (2 genomes, 714 marker genes, 109 marker sets)
-Nitrospira	Nitrospira (4 genomes, 676 marker genes, 379 marker sets)
-Nostocales	Nostocales (18 genomes, 732 marker genes, 508 marker sets)
-Opitutae	Opitutae (4 genomes, 676 marker genes, 427 marker sets)
-Oscillatoriales	Oscillatoriales (25 genomes, 545 marker genes, 415 marker sets)
-Planctomycetia	Planctomycetia (11 genomes, 360 marker genes, 256 marker sets)
-Pleurocapsales	Pleurocapsales (6 genomes, 840 marker genes, 624 marker sets)
-Prochlorales	Prochlorales (18 genomes, 806 marker genes, 240 marker sets)
-Solirubrobacterales	Solirubrobacterales (2 genomes, 995 marker genes, 398 marker sets)
-Sphingobacteriia	Sphingobacteriia (27 genomes, 334 marker genes, 233 marker sets)
-Spirochaetia	Spirochaetia (71 genomes, 218 marker genes, 127 marker sets)
-Stigonematales	Stigonematales (5 genomes, 1007 marker genes, 576 marker sets)
-Synergistia	Synergistia (13 genomes, 452 marker genes, 160 marker sets)
-Thermococci	Thermococci (16 genomes, 500 marker genes, 315 marker sets)
-Thermodesulfobacteria	Thermodesulfobacteria (5 genomes, 813 marker genes, 440 marker sets)
-Thermomicrobia	Thermomicrobia (2 genomes, 933 marker genes, 336 marker sets)
-Thermoplasmata	Thermoplasmata (4 genomes, 563 marker genes, 310 marker sets)
-Thermoprotei	Thermoprotei (54 genomes, 217 marker genes, 168 marker sets)
-Thermotogae	Thermotogae (14 genomes, 460 marker genes, 267 marker sets)
-Verrucomicrobiae	Verrucomicrobiae (7 genomes, 403 marker genes, 284 marker sets)
-Zetaproteobacteria	Zetaproteobacteria (2 genomes, 1329 marker genes, 184 marker sets)