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diff tool-data/phylum.loc.sample @ 5:d030ce59f075 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit ea21e425f6a04a586626c4a6d848aed1d1261b30
author iuc
date Sat, 16 Aug 2025 10:22:33 +0000
parents 626ab1058170
children
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--- a/tool-data/phylum.loc.sample	Tue Jun 17 12:58:00 2025 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,28 +0,0 @@
-# File generated by format_taxon_list.py script
-# taxon	description
-Acidobacteria	Acidobacteria (15 genomes, 399 marker genes, 276 marker sets)
-Actinobacteria	Actinobacteria (731 genomes, 204 marker genes, 119 marker sets)
-Aquificae	Aquificae (18 genomes, 486 marker genes, 369 marker sets)
-Bacteroidetes	Bacteroidetes (419 genomes, 286 marker genes, 195 marker sets)
-Chlamydiae	Chlamydiae (64 genomes, 455 marker genes, 185 marker sets)
-Chlorobi	Chlorobi (12 genomes, 612 marker genes, 333 marker sets)
-Chloroflexi	Chloroflexi (20 genomes, 225 marker genes, 149 marker sets)
-Crenarchaeota	Crenarchaeota (54 genomes, 217 marker genes, 168 marker sets)
-Cyanobacteria	Cyanobacteria (129 genomes, 472 marker genes, 368 marker sets)
-Deferribacteres	Deferribacteres (6 genomes, 564 marker genes, 339 marker sets)
-Deinococcus-Thermus	Deinococcus-Thermus (40 genomes, 528 marker genes, 359 marker sets)
-Dictyoglomi	Dictyoglomi (2 genomes, 1060 marker genes, 103 marker sets)
-Euryarchaeota	Euryarchaeota (146 genomes, 188 marker genes, 125 marker sets)
-Firmicutes	Firmicutes (1349 genomes, 172 marker genes, 99 marker sets)
-Fusobacteria	Fusobacteria (32 genomes, 289 marker genes, 159 marker sets)
-Ignavibacteriae	Ignavibacteriae (2 genomes, 1003 marker genes, 383 marker sets)
-Nitrospirae	Nitrospirae (4 genomes, 676 marker genes, 379 marker sets)
-Planctomycetes	Planctomycetes (11 genomes, 360 marker genes, 256 marker sets)
-Proteobacteria	Proteobacteria (2343 genomes, 182 marker genes, 119 marker sets)
-Spirochaetes	Spirochaetes (71 genomes, 218 marker genes, 127 marker sets)
-Synergistetes	Synergistetes (13 genomes, 452 marker genes, 160 marker sets)
-Tenericutes	Tenericutes (119 genomes, 177 marker genes, 105 marker sets)
-Thaumarchaeota	Thaumarchaeota (4 genomes, 548 marker genes, 265 marker sets)
-Thermodesulfobacteria	Thermodesulfobacteria (5 genomes, 813 marker genes, 440 marker sets)
-Thermotogae	Thermotogae (14 genomes, 460 marker genes, 267 marker sets)
-Verrucomicrobia	Verrucomicrobia (12 genomes, 346 marker genes, 245 marker sets)