Mercurial > repos > iuc > checkm_tree_qa

comparison tool-data/order.loc.sample @ 0:dd51f61c2309 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
author iuc
date Fri, 29 Jul 2022 20:30:47 +0000
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comparison
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-1:000000000000 0:dd51f61c2309
1 # File generated by format_taxon_list.py script
2 # taxon description
3 Acholeplasmatales Acholeplasmatales (12 genomes, 176 marker genes, 88 marker sets)
4 Acidilobales Acidilobales (3 genomes, 558 marker genes, 236 marker sets)
5 Acidithiobacillales Acidithiobacillales (6 genomes, 795 marker genes, 254 marker sets)
6 Acidobacteriales Acidobacteriales (10 genomes, 572 marker genes, 395 marker sets)
7 Aciduliprofundum Aciduliprofundum (2 genomes, 763 marker genes, 130 marker sets)
8 Actinomycetales Actinomycetales (620 genomes, 256 marker genes, 152 marker sets)
9 Aeromonadales Aeromonadales (23 genomes, 456 marker genes, 237 marker sets)
10 Alteromonadales Alteromonadales (116 genomes, 519 marker genes, 267 marker sets)
11 Aquificales Aquificales (18 genomes, 486 marker genes, 369 marker sets)
12 Archaeoglobales Archaeoglobales (5 genomes, 619 marker genes, 392 marker sets)
13 Bacillales Bacillales (331 genomes, 319 marker genes, 134 marker sets)
14 Bacteroidales Bacteroidales (210 genomes, 402 marker genes, 267 marker sets)
15 Bacteroidetes Order II. Incertae sedis Bacteroidetes Order II. Incertae sedis (5 genomes, 801 marker genes, 466 marker sets)
16 Bankia Bankia (2 genomes, 1388 marker genes, 332 marker sets)
17 Bdellovibrionales Bdellovibrionales (5 genomes, 466 marker genes, 290 marker sets)
18 Bifidobacteriales Bifidobacteriales (77 genomes, 464 marker genes, 220 marker sets)
19 Burkholderiales Burkholderiales (194 genomes, 427 marker genes, 216 marker sets)
20 Campylobacterales Campylobacterales (107 genomes, 458 marker genes, 273 marker sets)
21 Cardiobacteriales Cardiobacteriales (3 genomes, 807 marker genes, 349 marker sets)
22 Caulobacterales Caulobacterales (15 genomes, 644 marker genes, 366 marker sets)
23 Chlamydiales Chlamydiales (64 genomes, 455 marker genes, 185 marker sets)
24 Chlorobiales Chlorobiales (12 genomes, 612 marker genes, 333 marker sets)
25 Chloroflexales Chloroflexales (8 genomes, 501 marker genes, 342 marker sets)
26 Chromatiales Chromatiales (92 genomes, 595 marker genes, 283 marker sets)
27 Chroococcales Chroococcales (55 genomes, 490 marker genes, 378 marker sets)
28 Clostridiales Clostridiales (395 genomes, 202 marker genes, 114 marker sets)
29 Coriobacteriales Coriobacteriales (23 genomes, 304 marker genes, 155 marker sets)
30 Cytophagales Cytophagales (48 genomes, 438 marker genes, 328 marker sets)
31 Deferribacterales Deferribacterales (6 genomes, 564 marker genes, 339 marker sets)
32 Dehalococcoidales Dehalococcoidales (5 genomes, 755 marker genes, 54 marker sets)
33 Deinococcales Deinococcales (17 genomes, 563 marker genes, 388 marker sets)
34 Desulfobacterales Desulfobacterales (20 genomes, 320 marker genes, 189 marker sets)
35 Desulfovibrionales Desulfovibrionales (40 genomes, 454 marker genes, 252 marker sets)
36 Desulfurellales Desulfurellales (4 genomes, 817 marker genes, 252 marker sets)
37 Desulfurococcales Desulfurococcales (14 genomes, 287 marker genes, 213 marker sets)
38 Desulfuromonadales Desulfuromonadales (13 genomes, 550 marker genes, 283 marker sets)
39 Dictyoglomales Dictyoglomales (2 genomes, 1060 marker genes, 103 marker sets)
40 Enterobacteriales Enterobacteriales (262 genomes, 297 marker genes, 121 marker sets)
41 Entomoplasmatales Entomoplasmatales (9 genomes, 362 marker genes, 151 marker sets)
42 Erysipelotrichales Erysipelotrichales (18 genomes, 301 marker genes, 159 marker sets)
43 Flavobacteriales Flavobacteriales (126 genomes, 321 marker genes, 202 marker sets)
44 Fusobacteriales Fusobacteriales (32 genomes, 289 marker genes, 159 marker sets)
45 Halanaerobiales Halanaerobiales (7 genomes, 504 marker genes, 189 marker sets)
46 Halobacteriales Halobacteriales (59 genomes, 367 marker genes, 241 marker sets)
47 Holophagales Holophagales (2 genomes, 883 marker genes, 459 marker sets)
48 Hydrogenophilales Hydrogenophilales (3 genomes, 1205 marker genes, 209 marker sets)
49 Ignavibacteriales Ignavibacteriales (2 genomes, 1003 marker genes, 383 marker sets)
50 Lactobacillales Lactobacillales (490 genomes, 335 marker genes, 183 marker sets)
51 Legionellales Legionellales (23 genomes, 545 marker genes, 269 marker sets)
52 Mariprofundales Mariprofundales (2 genomes, 1329 marker genes, 184 marker sets)
53 Methanobacteriales Methanobacteriales (12 genomes, 513 marker genes, 264 marker sets)
54 Methanocellales Methanocellales (3 genomes, 712 marker genes, 317 marker sets)
55 Methanococcales Methanococcales (16 genomes, 610 marker genes, 439 marker sets)
56 Methanomicrobiales Methanomicrobiales (11 genomes, 465 marker genes, 230 marker sets)
57 Methanosarcinales Methanosarcinales (14 genomes, 438 marker genes, 270 marker sets)
58 Methylococcales Methylococcales (15 genomes, 684 marker genes, 348 marker sets)
59 Methylophilales Methylophilales (16 genomes, 685 marker genes, 234 marker sets)
60 Mycoplasmatales Mycoplasmatales (98 genomes, 217 marker genes, 127 marker sets)
61 Myxococcales Myxococcales (8 genomes, 534 marker genes, 348 marker sets)
62 Nautiliales Nautiliales (4 genomes, 712 marker genes, 351 marker sets)
63 Neisseriales Neisseriales (69 genomes, 658 marker genes, 446 marker sets)
64 Nitrosomonadales Nitrosomonadales (7 genomes, 851 marker genes, 314 marker sets)
65 Nitrosopumilales Nitrosopumilales (2 genomes, 714 marker genes, 109 marker sets)
66 Nitrospirales Nitrospirales (4 genomes, 676 marker genes, 379 marker sets)
67 Nostocales Nostocales (18 genomes, 732 marker genes, 508 marker sets)
68 Oceanospirillales Oceanospirillales (41 genomes, 497 marker genes, 229 marker sets)
69 Opitutales Opitutales (3 genomes, 859 marker genes, 521 marker sets)
70 Oscillatoriales Oscillatoriales (25 genomes, 545 marker genes, 415 marker sets)
71 Pasteurellales Pasteurellales (83 genomes, 767 marker genes, 440 marker sets)
72 Planctomycetales Planctomycetales (10 genomes, 370 marker genes, 265 marker sets)
73 Pleurocapsales Pleurocapsales (6 genomes, 840 marker genes, 624 marker sets)
74 Prochlorales Prochlorales (18 genomes, 806 marker genes, 240 marker sets)
75 Pseudomonadales Pseudomonadales (274 genomes, 549 marker genes, 326 marker sets)
76 Rhizobiales Rhizobiales (349 genomes, 407 marker genes, 244 marker sets)
77 Rhodobacterales Rhodobacterales (104 genomes, 504 marker genes, 327 marker sets)
78 Rhodocyclales Rhodocyclales (26 genomes, 625 marker genes, 264 marker sets)
79 Rhodospirillales Rhodospirillales (57 genomes, 367 marker genes, 228 marker sets)
80 Rickettsiales Rickettsiales (81 genomes, 325 marker genes, 210 marker sets)
81 Rubrobacterales Rubrobacterales (2 genomes, 991 marker genes, 269 marker sets)
82 Selenomonadales Selenomonadales (64 genomes, 334 marker genes, 167 marker sets)
83 Solirubrobacterales Solirubrobacterales (4 genomes, 721 marker genes, 307 marker sets)
84 Sphingobacteriales Sphingobacteriales (27 genomes, 334 marker genes, 233 marker sets)
85 Sphingomonadales Sphingomonadales (31 genomes, 490 marker genes, 270 marker sets)
86 Spirochaetales Spirochaetales (71 genomes, 218 marker genes, 127 marker sets)
87 Stigonematales Stigonematales (5 genomes, 1007 marker genes, 576 marker sets)
88 Sulfolobales Sulfolobales (20 genomes, 499 marker genes, 141 marker sets)
89 Synergistales Synergistales (13 genomes, 452 marker genes, 160 marker sets)
90 Thermales Thermales (23 genomes, 585 marker genes, 331 marker sets)
91 Thermoanaerobacterales Thermoanaerobacterales (44 genomes, 308 marker genes, 158 marker sets)
92 Thermococcales Thermococcales (16 genomes, 500 marker genes, 315 marker sets)
93 Thermodesulfobacteriales Thermodesulfobacteriales (5 genomes, 813 marker genes, 440 marker sets)
94 Thermoplasmatales Thermoplasmatales (4 genomes, 563 marker genes, 310 marker sets)
95 Thermoproteales Thermoproteales (13 genomes, 315 marker genes, 257 marker sets)
96 Thermotogales Thermotogales (14 genomes, 460 marker genes, 267 marker sets)
97 Thiotrichales Thiotrichales (64 genomes, 406 marker genes, 251 marker sets)
98 Verrucomicrobiales Verrucomicrobiales (7 genomes, 403 marker genes, 284 marker sets)
99 Vibrionales Vibrionales (80 genomes, 922 marker genes, 367 marker sets)
100 Xanthomonadales Xanthomonadales (63 genomes, 499 marker genes, 264 marker sets)