Mercurial > repos > iuc > chewbbaca_createschema

comparison CreateSchema.xml @ 3:ae1374a5ecdf draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/chewbbaca commit 8bb518e20d68623904232ae28bb8a51ec05c1c4a
author iuc
date Wed, 25 Sep 2024 14:14:22 +0000
parents 6a8df4d75f3a
children
comparison
equal deleted inserted replaced
2:6a8df4d75f3a 3:ae1374a5ecdf
52 <filter>output['show_cds_coord']</filter> 52 <filter>output['show_cds_coord']</filter>
53 </data> 53 </data>
54 </outputs> 54 </outputs>
55 <tests> 55 <tests>
56 <test expect_num_outputs="1"> 56 <test expect_num_outputs="1">
57 <param name="input_file" value="GCA_000007265.1_ASM726v1_genomic.fna"/> 57 <param name="input_file" value="GCA_000007265.fna"/>
58 <output name="schema"> 58 <output name="schema">
59 <assert_contents> 59 <assert_contents>
60 <has_archive_member path="schema_seed/.*\.fasta" n="204"/> 60 <has_archive_member path="schema_seed/.*\.fasta" n="204"/>
61 <has_archive_member path="schema_seed/short/.*\.fasta" n="102"/> 61 <has_archive_member path="schema_seed/short/.*\.fasta" n="102"/>
62 <has_archive_member path="schema_seed/\.schema_config"/> 62 <has_archive_member path="schema_seed/\.schema_config"/>
63 </assert_contents> 63 </assert_contents>
64 </output> 64 </output>
65 </test> 65 </test>
66 <test expect_num_outputs="1"> 66 <test expect_num_outputs="1">
67 <param name="input_file" value="GCA_000007265.1_ASM726v1_genomic"/> 67 <param name="input_file" value="GCA_000007265"/>
68 <output name="schema"> 68 <output name="schema">
69 <assert_contents> 69 <assert_contents>
70 <has_archive_member path="schema_seed/.*\.fasta" n="204"/> 70 <has_archive_member path="schema_seed/.*\.fasta" n="204"/>
71 <has_archive_member path="schema_seed/short/.*\.fasta" n="102"/> 71 <has_archive_member path="schema_seed/short/.*\.fasta" n="102"/>
72 <has_archive_member path="schema_seed/\.schema_config"/> 72 <has_archive_member path="schema_seed/\.schema_config"/>
73 </assert_contents> 73 </assert_contents>
74 </output> 74 </output>
75 </test> 75 </test>
76 <test expect_num_outputs="1"> 76 <test expect_num_outputs="1">
77 <param name="input_file" value="GCA_000007265.1_ASM726v1_genomic.fna"/> 77 <param name="input_file" value="GCA_000007265.fna"/>
78 <param name="training_file" value="Streptococcus_agalactiae.trn"/> 78 <param name="training_file" value="Streptococcus_agalactiae.trn"/>
79 <output name="schema"> 79 <output name="schema">
80 <assert_contents> 80 <assert_contents>
81 <has_archive_member path="schema_seed/.*\.fasta" n="198"/> 81 <has_archive_member path="schema_seed/.*\.fasta" n="198"/>
82 <has_archive_member path="schema_seed/short/.*\.fasta" n="99"/> 82 <has_archive_member path="schema_seed/short/.*\.fasta" n="99"/>